Gene detail information of Glyur000109s00010662 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN03396.1 | 1.37E-31 | Chromatin structure-remodeling complex subunit snf21, partial [Glycine soja] |
| Swissprot | tr|F4IHS2|SYD_ARATH | 1.00E-11 | Chromatin structure-remodeling complex protein SYD |
| trEMBL | tr|K7MJJ7|K7MJJ7_SOYBN | 2.00E-31 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G02540.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00109 | 299006 | 300836 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.044 |
| SRR1783600 | control | 1.261 |
| SRR1783602 | moderate drought stress | 3.851 |
| SRR1811619 | moderate drought stress | 3.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.336 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.154 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.988 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.672 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.419 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.918 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.112 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.963 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.681 |
| SRR2868004 | Drought Stress (root) | 5.348 |
| SRR2967015 | Control (root) | 6.934 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.493 |
| SRR9715740 | Leaf | 1.075 |
| SRR9715741 | Leaf | 1.553 |
| SRR9715739 | Root | 0.513 |
| SRR9715742 | Root | 1.391 |
| SRR9715743 | Root | 1.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.472 |
| SRR8749028 | MeJA induced 9h | 0.937 |
| SRR8749029 | MeJA induced 9h | 1.035 |
| SRR8749030 | Uninduced | 0.629 |
| SRR8749031 | Uninduced | 0.563 |
| SRR8749032 | Uninduced | 0.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.581 |
| SRR8400027 | Control - Root | 9.502 |