Gene detail information of Glyur000109s00010643 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G60380.1 | 5.00E-32 | |
| NR | KHN20479.1 | 0 | hypothetical protein glysoja_037355 [Glycine soja] |
| trEMBL | tr|V7B580|V7B580_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW11616.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00109 | 193946 | 199681 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.547 |
| SRR1783600 | control | 6.364 |
| SRR1783602 | moderate drought stress | 4.920 |
| SRR1811619 | moderate drought stress | 4.820 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.947 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.136 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.254 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.180 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.837 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.874 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.029 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.579 |
| SRR2868004 | Drought Stress (root) | 7.925 |
| SRR2967015 | Control (root) | 7.154 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.081 |
| SRR9715740 | Leaf | 4.128 |
| SRR9715741 | Leaf | 4.605 |
| SRR9715739 | Root | 0.856 |
| SRR9715742 | Root | 4.576 |
| SRR9715743 | Root | 3.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.892 |
| SRR8749028 | MeJA induced 9h | 3.341 |
| SRR8749029 | MeJA induced 9h | 2.200 |
| SRR8749030 | Uninduced | 0.541 |
| SRR8749031 | Uninduced | 0.176 |
| SRR8749032 | Uninduced | 0.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.450 |
| SRR8400027 | Control - Root | 10.740 |