Gene detail information of Glyur000109s00010642 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G14000.1 | 8.00E-62 | Putative methyltransferase family protein |
| NR | XP_004489175.1 | 1.83E-29 | PREDICTED: histidine protein methyltransferase 1 homolog isoform X2 [Cicer arietinum] |
| trEMBL | tr|I3S9D2|I3S9D2_MEDTR | 1.00E-29 | Uncharacterized protein {ECO:0000313|EMBL:AFK36874.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00109 | 187557 | 190774 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000109s00010642.2 | PF10294.4 | Methyltransf_16 | 70 | 211 | 2.70E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.345 |
| SRR1783600 | control | 7.443 |
| SRR1783602 | moderate drought stress | 7.012 |
| SRR1811619 | moderate drought stress | 6.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.600 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.342 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.856 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.471 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.154 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.763 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.939 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.866 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.362 |
| SRR2868004 | Drought Stress (root) | 21.401 |
| SRR2967015 | Control (root) | 22.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.392 |
| SRR9715740 | Leaf | 5.975 |
| SRR9715741 | Leaf | 5.792 |
| SRR9715739 | Root | 5.386 |
| SRR9715742 | Root | 8.301 |
| SRR9715743 | Root | 7.218 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.759 |
| SRR8749028 | MeJA induced 9h | 4.540 |
| SRR8749029 | MeJA induced 9h | 4.375 |
| SRR8749030 | Uninduced | 5.528 |
| SRR8749031 | Uninduced | 3.737 |
| SRR8749032 | Uninduced | 4.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.139 |
| SRR8400027 | Control - Root | 16.097 |