Gene detail information of Glyur000109s00010622 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_004489172.1 | 9.04E-132 | PREDICTED: putative KHG/KDPG aldolase-like [Cicer arietinum] |
| COG | YP_006527614.1 | 3.00E-34 | 2-dehydro-3-deoxyphosphogluconate aldolase/4- hydroxy-2-oxoglutarate aldolase [Melioribacter roseus P3M-2] |
| trEMBL | tr|A2Q5T0|A2Q5T0_MEDTR | 3.00E-124 | KDPG and KHG aldolase {ECO:0000313|EMBL:ABN08950.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00109 | 64859 | 67807 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000109s00010622.1 | PF01081.14 | Aldolase | 55 | 231 | 4.10E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.498 |
| SRR1783600 | control | 0.619 |
| SRR1783602 | moderate drought stress | 0.838 |
| SRR1811619 | moderate drought stress | 0.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.439 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.474 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.224 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.137 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.545 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.470 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.280 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.987 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.624 |
| SRR2868004 | Drought Stress (root) | 1.154 |
| SRR2967015 | Control (root) | 1.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.245 |
| SRR9715740 | Leaf | 2.170 |
| SRR9715741 | Leaf | 1.895 |
| SRR9715739 | Root | 1.080 |
| SRR9715742 | Root | 0.612 |
| SRR9715743 | Root | 0.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.481 |
| SRR8749028 | MeJA induced 9h | 0.135 |
| SRR8749029 | MeJA induced 9h | 0.449 |
| SRR8749030 | Uninduced | 0.153 |
| SRR8749031 | Uninduced | 0.010 |
| SRR8749032 | Uninduced | 0.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.045 |
| SRR8400027 | Control - Root | 2.246 |