Gene detail

Gene detail information of Glyur000109s00010621.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G39890.1	3.00E-91	Protein of unknown function (DUF1637)
NR	XP_007139596.1	9.15E-152	hypothetical protein PHAVU_008G043100g [Phaseolus vulgaris]
trEMBL	tr\|V7B206\|V7B206_PHAVU	3.00E-152	Uncharacterized protein {ECO:0000313\|EMBL:ESW11590.1}

Sequence

Transcript Sequence

>Glyur000109s00010621.1
CACAAACCACTCTCCCCTCTCTCTCTGTTTCTGCGTGTCTTTATATTTGTCCTTGTCTCTCTCTTTAATTTCCCTGTTGTCATTCAATCCTCTTCCTCTTTTATACATATCCATCCCTACAATGCCAACATCCATTTTCACTTCTCTACCCTCTCCCTTTTACCATTTTACCTCTCCAAAACCCTCTTAGAATCTCTTACCCCCACAAATAGGCGTTGTTTATTTCATCTTTTCACATNTTTTTACCATACCCATTGGCCACAATTCCATTCTCAACATCCCTGATTGGTACTAGAGCCATTCCCCTGTGAAAGTTTTATCCTTGCTCCGTGTTCGTTTTGTGGGTCTGTTTTACTGCTCTGTATTGGATTTGAACTTGAATGGGGATTGGGAGGAACTTGGGTGATAATAAAGGGAGAGAGTTGTGTGAATTACCCGAAGAGACGAATACCAACAGCAAATCTAGGAAGAACCGGCGACACCGTCAGAGGAAGATGTCGCCGGTTCAGAGACTCTTTGAGACTTGCAAACAAGTGTTTGCCTCCACTGCCCCTGGAATTATCCCTTCTCCTCAACACATTGAAATGCTTCGTTCTGTTCTAGCTGGAATAAAACCAGAAGACGTTGGCTTGAAACCTGATATGCCATATTTCAGCAATAACAATCCTCGAAGAACGCCAAAAATCACATACCTTCACATTTATGAGTGTGAAAAATTCTCGATTGGTATATTTTGCTTGCCACCTTCTGGAGTTATTCCTCTGCATAATCACCCCGGAATGACGGTTTTTAGCAAGCTTCTTTTTGGAACCATGCACATCAAATCTTATGATTGGGTCGTTGATTTGCCTCCTCCTGAGGTGCCCACCATTTCTCAACCATCACAAACAACAGAAAGTGAGTTTTTTTCTTCCTATTTTATATTCTTTTCATTGTTGCACTGTTCACTATTTCTTATTTATGTGTTTTCGTACGATAAAAATAATCTGCATGTTCCAACTATGCCAGTCCAGACTCCGGAGAGAAGGTTGGCTAAAGTTAAGGTTGACGCTGATTTCACTGCTCCTTGTGACCCTTCCATCCTTTATCCTGCTGAAGGGGGAAACATGCATTGCTTCACGGCAGTGACAGCTTGTGCGGTTCTAGATGTGCTTGGTCCTCCCTACTCTGATCCTGATGGCAGGCACTGCACTTACTACCACAGTTTCCCCTTTTCCAACTTTCCAGTTGATGGAAGATCCATACCAGAAGAGGAAAGGACAGCTTATGAATGGCTTCAAGAGAGGGAGAAACCTGAGAGTCTGCAAGTAGTAGTGAAAATGTACAGCGGCCCAAAGATTGTGGAGAACTAANCATGCATGTCTTGTCACACTCATGACTCATCATCATCTTCCTGTTCCTGTGGTCTCTGTTGCTTTAGTCAAACATTCCTGTAGACACAGTTTGTTCATCAATCTTTGCTCATTTGATGTCACCCTTTCTGTTTGTCCTCTAGTGAAGCTTGGTCATCTTTTTGTTCTAGTATACTTCTTTAGTACTTTACATGAGGCACCTGGTTTGGTGGGTGCTGTTTTGTTTTCAGTCTACAGTTATTGTTATTATTATGTATGTACATACCAAAAACAGGAAAGGACAAATGCTGCATTTGAAAATGGAATCAGAATGAGAGTGCAAGCTAGGGAATGAGCATTACCTAGTTTTGTGAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00109	57561	61780	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K10712	ADO	EC:1.13.11.19	Taurine and hypotaurine metabolism	map00430

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function
GO:0047800 cysteamine dioxygenase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000109s00010621.1	PF07847.7	DUF1637	74	320	1.00E-67

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	17.218
SRR1783600	control	17.672
SRR1783602	moderate drought stress	2.538
SRR1811619	moderate drought stress	2.726

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	16.220
DRR006520	Root Summer glycyrrhizin high producing strain	15.861
DRR006521	Root Winter glycyrrhizin high producing strain	49.851
DRR006522	Root Winter glycyrrhizin high producing strain	48.553
DRR006523	Root Summer glycyrrhizin low producing strain	39.632
DRR006524	Root Summer glycyrrhizin low producing strain	39.480
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.623
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.504

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.249
SRR2868004	Drought Stress (root)	7.241
SRR2967015	Control (root)	10.038

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.011
SRR9715740	Leaf	5.665
SRR9715741	Leaf	4.382
SRR9715739	Root	25.705
SRR9715742	Root	37.640
SRR9715743	Root	33.801

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	74.446
SRR8749028	MeJA induced 9h	154.978
SRR8749029	MeJA induced 9h	97.937
SRR8749030	Uninduced	38.522
SRR8749031	Uninduced	48.101
SRR8749032	Uninduced	58.606

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	33.413
SRR8400027	Control - Root	25.735