Gene detail

Gene detail information of Glyur000109s00010619

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G15130.1	1.00E-23	WRKY DNA-binding protein 72
NR	XP_004489160.1	0	PREDICTED: probable WRKY transcription factor 72-like [Cicer arietinum]
Swissprot	tr\|Q9LXG8\|WRK72_ARATH	2.00E-41	Probable WRKY transcription factor 72
trEMBL	tr\|I1L5Z4\|I1L5Z4_SOYBN	1.00E-180	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G37470.1}

Sequence

Transcript Sequence

>Glyur000109s00010619.1
ATGTCTAGTACTTCTTGTGGTCCAGAGATAGAAGAGAAGAGAATTACTTCAATCTTTTGTGAAGATGATTTCCGTACTCAAAAGGTTAGAAAGGAAGATAGAGTCAAATCTGCTAAAGCTGAGATGGGTGAGGTGAAAGAAGAGAATGAGAGATTGAAGATGATGCTGGAGAGAGTAGAAAAGGACTACCACTCCCTTCAACTCCGTTTCTTTGACATNCTTCACAAAGATGTTTCTAAGAAAGGTGTAGCAGCAGATTCATCTACTACTTCCCATGATGAAACTGAAGAACCAGCTGAGCTTGTGTCACTTTGCCTTGGAAGAAGTCCAAAGGAGTCTAATAAGAAAGAAGCAGCAAGAACTGGAGACTCCTCCAACAAGCCTAAAGAAAAAGTAGAAGATATGGAAGTCAACCTTACTCTTGGATTAGACTCCAAATATCTNTTGTCAATGGAGCTAGTATCTGATTTGAGTCCCATGAACAGCTCAGAATTAGAACAAAAGGAAGCAGAACCGGAAGGAACAACAACATTGTCAACAAATAAATCAGCAAAAGTGATAAATGTAAATGATGAAAGTTCAGATCAAATGCCTGCCAAGAGAGCCAGGGTATCTGTGAGAGCTAAATGTGANACTCCCACGGTGCAAAGATGTGCTGAGGACNTGTCCATCTTAATCACCACATATGAAGGAACCCACAACCACCCACTTCAAGTCTCAGCCACAGCCATGGCATCAGTCACTTCTGCTGCAGCTTCAATGATGTTGTCAGGTTCCTCAACATCTCAGCATTATGCAGGTCATCACAGTTCTGCATCTTTTGGAACAAATTCTCCAACAGTGCTCAATGGCCTGAGTTTCAGTCNGCAGTATGATCAGGAGTACTCAAGAGCAAAAGAGCTCTTCTTACCACCACCAAACCATGCCTCACATTTGTTCCCAATAGTCACTCTAGACCTCACTTCTTCTGCATCATTCTCCTCCTCACAAACTCATGTCCATAACAACTTACCTTCAAACATAGCTTCAAGCACAAGATTTTCCCCACCTAGTCTCAGCTTTTGTTCCCCACCGGAGCCCAACTTCACACCATCCATTTGGGCCAAGGGATTCCCTAATAAAACCCAGACAAGGCCCATTATCCAAGGAAACCATTTCCAAGAACATTTACAGTGCATGATGACAAACCAAACTCCTCCTTCAAGGGAAGCTTTGGCAGAAACAATAACCAAAGCAATCAGCACAGATCCAAGCCTTAGGTCAGTAATAGCTGCTGCAGTTTCATCANTAGTGGGAACAGGATCAACCAGTGGGGACCAAGCTCATGAAGAAATTAGAGAGAACAATAATATTCTAGGTCCAGGAGGGTTGAACTTGAGACTAGGGGAGCATATTCCTCAACTGGTTTCATCATCCAATCAGAATGGGAAAGGCCAATGCTTAACAGGTTACTTCAAAAGGTTGTCCCCTACAAGTTNACAGGCCAGAAATTTCATGCTTCTCCAACCTTCTTCTTTGCCATTCTCTCTCTCCAAGAGTAGCACAAGCAAACCTCCTTCCTTTGTTAATCACATCAACCATTATGATCCAGATATGAACACACATCATTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00109	46286	49295	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.070
SRR1783600	control	10.753
SRR1783602	moderate drought stress	11.630
SRR1811619	moderate drought stress	11.339

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.000
DRR006524	Root Summer glycyrrhizin low producing strain	0.000
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.058
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.114

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.813
SRR2868004	Drought Stress (root)	4.848
SRR2967015	Control (root)	8.533

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.605
SRR9715740	Leaf	0.273
SRR9715741	Leaf	0.729
SRR9715739	Root	1.396
SRR9715742	Root	5.331
SRR9715743	Root	5.077

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	41.978
SRR8749028	MeJA induced 9h	30.633
SRR8749029	MeJA induced 9h	46.471
SRR8749030	Uninduced	311.474
SRR8749031	Uninduced	82.100
SRR8749032	Uninduced	57.751

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.663
SRR8400027	Control - Root	3.272