Gene detail information of Glyur000109s00010615 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006587758.1 | 0 | PREDICTED: uncharacterized protein LOC100791552 [Glycine max] |
| COG | YP_008156103.1 | 3.00E-98 | hypothetical protein SCE1572_48810 [Sorangium cellulosum So0157-2] |
| trEMBL | tr|K7LFR7|K7LFR7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G37461.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00109 | 23496 | 28657 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000109s00010615.1 | PF13360.1 | PQQ_2 | 63 | 226 | 3.30E-12 |
| Glyur000109s00010615.1 | PF13360.1 | PQQ_2 | 428 | 504 | 4.00E-08 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.863 |
| SRR1783600 | control | 0.884 |
| SRR1783602 | moderate drought stress | 1.142 |
| SRR1811619 | moderate drought stress | 1.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.067 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.134 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.210 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.205 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.036 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.123 |
| SRR2868004 | Drought Stress (root) | 30.485 |
| SRR2967015 | Control (root) | 4.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.200 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.220 |
| SRR9715743 | Root | 0.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.117 |
| SRR8749028 | MeJA induced 9h | 0.040 |
| SRR8749029 | MeJA induced 9h | 0.192 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.210 |
| SRR8749032 | Uninduced | 0.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.346 |
| SRR8400027 | Control - Root | 6.101 |