Gene detail information of Glyur000109s00010612 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G49190.1 | 5.00E-46 | O-acyltransferase (WSD1-like) family protein |
| NR | XP_003551727.1 | 0 | PREDICTED: O-acyltransferase WSD1-like [Glycine max] |
| COG | YP_001141853.1 | 2.00E-17 | hypothetical protein ASA_2036 [Aeromonas salmonicida subsp. salmonicida A449] |
| Swissprot | tr|Q93ZR6|WSD1_ARATH | 3.00E-43 | O-acyltransferase WSD1 |
| trEMBL | tr|K7MUS2|K7MUS2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G49256.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00109 | 11577 | 14601 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000109s00010612.1 | PF03007.11 | WES_acyltransf | 69 | 262 | 4.00E-12 |
| Glyur000109s00010612.1 | PF06974.8 | DUF1298 | 311 | 462 | 5.10E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.085 |
| SRR1783600 | control | 12.750 |
| SRR1783602 | moderate drought stress | 4.837 |
| SRR1811619 | moderate drought stress | 5.187 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.032 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.064 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 45.268 |
| SRR2868004 | Drought Stress (root) | 31.118 |
| SRR2967015 | Control (root) | 14.013 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.231 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.366 |
| SRR9715739 | Root | 9.713 |
| SRR9715742 | Root | 10.351 |
| SRR9715743 | Root | 11.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.266 |
| SRR8749031 | Uninduced | 1.462 |
| SRR8749032 | Uninduced | 0.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 79.834 |
| SRR8400027 | Control - Root | 68.349 |