Gene detail information of Glyur000108s00010447.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75420.1 | 0 | UDP-Glycosyltransferase superfamily protein |
| NR | XP_007136633.1 | 0 | hypothetical protein PHAVU_009G060600g [Phaseolus vulgaris] |
| COG | YP_558793.1 | 1.00E-14 | first mannosyl transferase, WbaZ [Burkholderia xenovorans LB400] |
| trEMBL | tr|V7ASI7|V7ASI7_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW08627.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00108 | 331278 | 335450 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Carbohydrate-Active enzymes Family | GT4 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000108s00010447.1 | PF00534.15 | Glycos_transf_1 | 307 | 465 | 1.20E-16 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.655 |
| SRR1783600 | control | 7.647 |
| SRR1783602 | moderate drought stress | 5.786 |
| SRR1811619 | moderate drought stress | 5.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.784 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.706 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.870 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.815 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.193 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.258 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.431 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.360 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.049 |
| SRR2868004 | Drought Stress (root) | 8.405 |
| SRR2967015 | Control (root) | 7.068 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.856 |
| SRR9715740 | Leaf | 1.807 |
| SRR9715741 | Leaf | 2.060 |
| SRR9715739 | Root | 2.166 |
| SRR9715742 | Root | 4.625 |
| SRR9715743 | Root | 3.140 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.214 |
| SRR8749028 | MeJA induced 9h | 5.538 |
| SRR8749029 | MeJA induced 9h | 5.343 |
| SRR8749030 | Uninduced | 2.229 |
| SRR8749031 | Uninduced | 1.478 |
| SRR8749032 | Uninduced | 1.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.933 |
| SRR8400027 | Control - Root | 16.512 |