Gene detail information of Glyur000108s00010435 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75460.1 | 3.00E-69 | ATP-dependent protease La (LON) domain protein |
| NR | XP_003523729.1 | 4.13E-121 | PREDICTED: uncharacterized protein LOC100807718 [Glycine max] |
| COG | YP_007156843.1 | 3.00E-62 | peptidase S16 lon domain protein [Anabaena cylindrica PCC 7122] |
| trEMBL | tr|I1JT74|I1JT74_SOYBN | 2.00E-121 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G03100.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00108 | 281308 | 282150 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000108s00010435.1 | PF02190.11 | LON | 59 | 260 | 1.70E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.043 |
| SRR1783600 | control | 0.044 |
| SRR1783602 | moderate drought stress | 0.223 |
| SRR1811619 | moderate drought stress | 0.212 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.126 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.529 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.517 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 165.982 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 181.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.734 |
| SRR2868004 | Drought Stress (root) | 3.241 |
| SRR2967015 | Control (root) | 1.577 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 104.708 |
| SRR9715740 | Leaf | 200.683 |
| SRR9715741 | Leaf | 113.919 |
| SRR9715739 | Root | 0.471 |
| SRR9715742 | Root | 0.290 |
| SRR9715743 | Root | 0.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.936 |
| SRR8749028 | MeJA induced 9h | 4.510 |
| SRR8749029 | MeJA induced 9h | 3.034 |
| SRR8749030 | Uninduced | 0.568 |
| SRR8749031 | Uninduced | 0.117 |
| SRR8749032 | Uninduced | 0.746 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.220 |
| SRR8400027 | Control - Root | 1.567 |