Gene detail

Gene detail information of Glyur000108s00010419

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G19900.1	2.00E-177	glyoxal oxidase-related protein
NR	XP_004499224.1	0	PREDICTED: galactose oxidase-like [Cicer arietinum]
COG	YP_003954498.1	3.00E-17	hypothetical protein STAUR_4893 [Stigmatella aurantiaca DW4/3-1]
trEMBL	tr\|G7I5Z0\|G7I5Z0_MEDTR	0	Glyoxal oxidase amino-terminal protein {ECO:0000313\|EMBL:AES59630.1}

Sequence

Transcript Sequence

>Glyur000108s00010419.1
ATGCAGCTTCTCCACAACGACCGCATCGTCATTTTTGACCGCACAGACTTCGGCCTCTCCAACCTCTCCTTACCCAACGGNAGGTGCCGCCACGACNCCAATGAAACCGCCNTGAAAACCGACTGCACTGCACACTCCATTGAATATGACGTCGCATCCAACACGTTCCGCGCTCTCTTCGTCCAAACCGACGTGTGGTGCTCCTCCGGCTCGGTGGCTCCNGACGGCACACTCNTCCAAACCGGTGGCTACAACGACGGAGAGCACACCGTTCGTACCTACAACCCCTGCCCCANTTGCGATTGGCAAGAGTTTCATGCCGGACTCGCTGCCCAGAGATGGTATGCCACCAACCATAAGTTGCCGGACGGACGCCAAATTGTGATTGGCGGTAGCAGGCAGTTCAACTTTGAGTTTTACCCCAAAACCGATGCTGCCACTAGTAAAAACTTGTATGGTTTACCATTTCTGGTTCAGACCAATGACCCTCACCAGGAAAATAATTTGTACCCCTTTGTTTTTCTCAACGTCGACGGCAACCTCTTTATCTTCGCCAATGACAGAGCCATCTTGTTCGATTATACTAAGAANGTGGTGGTGAGAACATTCCCACAAGTGCCAGGTGGGGATCCCAGGTGTTACCCTAGCACCGGTTCCGCAGTGTTGTTGCCCTTGAGGAATCTTAGTGCACAGTCTTTGGAAGCGGAGGTTTTGGTTTGTGGGGGAGCCCCAAGAGGGTCCTATCTTCGAGCAAAAAAAGGTGAGTTTATCGCAGCATTGAATACATGTGCNCGCATCAAAATAACTGACCCAGACCCAAAATGGGCATTGGAGACCATGCNCGGGCCTAGAGTCATGAGCGACATGGTGATGCTCCCAAATGGCAATGTTTTGATAATCAACGGAGNGACTTCGGGTACCGCCGGGTGGGAATTGGGGCNGGACCCTGTTCTGAGCCCGTTTCTTTACAAGACTCAAAANCCAATTGGGTCACGGTTTGAATTGCAAAACCCGTCTAGCACACCTAGGATGTACCATTCCACGGCCGTTTTGGTTCGCGACGGGAGGGTTCTTGTTGCAGGCAGCAACCCTCACGAGGGTTACAGTTTCACCAATGTGTTGTTTCCGACGGAGCTCAGTGTGGAGGCATTTTCTCCTTCGTATCTCGAACCTGGCTTCTTGAATGTTCGTCCGAGGATTGTGTCCCCTGCTTTGGAGTCCCGAACCAAACTCATGTACGGCCAAAAGTTGGAGTTGCGATTCCAGGTGGGACCAGCAACACTGGATCAGAACTCAGTGTNTGTCACGGTGTTGGCGCCGCCTTTTAACACACACTCTTTCTCCATGAATCAGAGGTTACTAGTATTGGAGCCAACAAGNAGAGTGGGTAATGTGGGGGAGTCAATATATGAAATTGAGGTCACCATGCCTGGTTCTCCTATTCTTGCACCCCCTGGTTTTTATCTATTATTTGTGGTCCACGGAGAAATTCCTAGCGATGTGGTCGGCGGTGAGGGACAATGGGAGCTTCTACAGAAAAGCATAGGCATTGTAGCCATGCACATGCAGCTTCTCCACAATGACCGCATCGTCATTTTTGACCGCACCGACTTTGGCCTCTCCAACCTCTCCTTACCCAATGGCAGGTGCCGCCACGACCCTAATGAAACCGTCGTGAAAACAGACTGCACCGCCCACTCCGTCGAATACGACGTCGCATCCAACACGTTCCGCGCGCTCTTTGTCCAAACCGATGTTTGGTGCTCCTCCGGCTCAGTGGCTCCAGATGGCACACTCGTCCAGACTGGCGGCTACAACGACGGAGAGTACACCGTTCGTACCTACAGCCCCTGCCCCACCTGTGATTGGCAAGAGTTTCACGCCGGACTCGCCGCCCGAAGATGGTACTCCACCAACCATAAGCTGCCGGCCGGACGGCCGTCAGATTGTGATTGGTGGCAGGAGGCAGTTCAACTTCGAACCTATGACCCTAACCAAGAGAATAACCTGTACCCCTTTGTTTTTCTCAACGTTGACGGCAACCTCTTCATCTTCGCCAACGACAGAGCCATCTTGTTNGATTATACTAAGAACGTGGTGGTGAGAACATTCCCACAGGTGCCAGATGGNGATCCCAGGTGTTACCCTAGCACTGGTTCTGCGGTGTTGTTGCCCTTGAGGAATCTAAGTGCGCAGTCTTTGGAAGCAGAGGTTTTGGTTTGTGGGGGAGCCCCAAGAGGGTCTTATCTTCGAGCAAAAAAGGGTGAGTTTATTGCAGCATTGAATACNTGTGCGCGCATCAAAATAACTGACCCAGACCCGAAATGGGCATTGGAGACCATGCCCGAGCCTAGAGTCATGAGCGACATGGTGATGCTCCCAAACGGCAATGTTTTGATAATCAACGGAGCGACTTTGGGTACTGCNGGGTGGGAATTGGGGCGGGACCCGATTATGAGCCCATTTCTTTACAAGACTCAAAACCCAATTGGGTCACGGTTTGAATTGCAAAACCCATCTAGCACGCCCCGGATGTACCATTCCACAGCCGTTTTGGTTCGTGACGGGAGGGTTCTCGTTGCAGGCAGTAACCCTCACGTGGGTTACAGTTTCACCAATTCCCAAACCAAACTCACGTACGGCCAGAAGTTGGAGCTGCAATTCCAGGTGGGACCAGCAACGCTGGATCAAAACTCGGTGTCTGTCACGGTGTTGGCGCCGCCTTTTAACACACATTCGTTCTCCATGAATCAGAGATTATTGGTGTTGGAGCCAACAAGNAGAGTGGGTAATGTNGGGGAGTCGATGTATGAAATTGAGGTCACCATGGCTGGTTCTCCTATTCTTGCACCCCCCGGTTTTTATCTATTATTTGTGGTCCACGGAGAAATTCCCAGCGAGGGTATTTGGATCGAGATACATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00108	138606	146112	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000108s00010419.1	PF07250.6	Glyoxal_oxid_N	1	242	3.90E-104
Glyur000108s00010419.1	PF09118.6	DUF1929	397	499	7.30E-18
Glyur000108s00010419.1	PF07250.6	Glyoxal_oxid_N	520	646	9.30E-53
Glyur000108s00010419.1	PF07250.6	Glyoxal_oxid_N	659	743	3.70E-33
Glyur000108s00010419.1	PF09118.6	DUF1929	872	973	3.10E-20

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.319
SRR1783600	control	2.232
SRR1783602	moderate drought stress	3.075
SRR1811619	moderate drought stress	3.116

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.311
DRR006520	Root Summer glycyrrhizin high producing strain	1.419
DRR006521	Root Winter glycyrrhizin high producing strain	1.106
DRR006522	Root Winter glycyrrhizin high producing strain	1.105
DRR006523	Root Summer glycyrrhizin low producing strain	5.572
DRR006524	Root Summer glycyrrhizin low producing strain	5.804
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.413
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.506

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.194
SRR2868004	Drought Stress (root)	0.269
SRR2967015	Control (root)	0.239

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.184
SRR9715740	Leaf	0.125
SRR9715741	Leaf	0.112
SRR9715739	Root	0.140
SRR9715742	Root	0.072
SRR9715743	Root	0.120

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.823
SRR8749028	MeJA induced 9h	14.243
SRR8749029	MeJA induced 9h	5.704
SRR8749030	Uninduced	0.201
SRR8749031	Uninduced	0.248
SRR8749032	Uninduced	0.793

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.564
SRR8400027	Control - Root	0.481