Gene detail information of Glyur000107s00007266 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11970.1 | 3.00E-20 | Protein of unknown function (DUF3511) |
| NR | KHN29707.1 | 6.42E-64 | hypothetical protein glysoja_016329 [Glycine soja] |
| trEMBL | tr|I1JTY4|I1JTY4_SOYBN | 2.00E-64 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G05570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00107 | 269444 | 269788 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000107s00007266.1 | PF12023.3 | DUF3511 | 68 | 113 | 1.40E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.758 |
| SRR1783600 | control | 15.074 |
| SRR1783602 | moderate drought stress | 11.676 |
| SRR1811619 | moderate drought stress | 11.825 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 26.243 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.932 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 155.905 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 147.854 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 86.226 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 89.171 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 20.461 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 104.841 |
| SRR2868004 | Drought Stress (root) | 164.791 |
| SRR2967015 | Control (root) | 127.008 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 60.567 |
| SRR9715740 | Leaf | 70.699 |
| SRR9715741 | Leaf | 89.513 |
| SRR9715739 | Root | 86.510 |
| SRR9715742 | Root | 67.491 |
| SRR9715743 | Root | 75.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 275.699 |
| SRR8749028 | MeJA induced 9h | 287.305 |
| SRR8749029 | MeJA induced 9h | 343.914 |
| SRR8749030 | Uninduced | 330.952 |
| SRR8749031 | Uninduced | 424.289 |
| SRR8749032 | Uninduced | 673.809 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 83.447 |
| SRR8400027 | Control - Root | 74.622 |