Gene detail information of Glyur000107s00007256 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33090.1 | 4.00E-18 | aminopeptidase M1 |
| NR | XP_010437807.1 | 3.94E-19 | PREDICTED: aminopeptidase M1 [Camelina sativa] |
| Swissprot | tr|Q8VZH2|APM1_ARATH | 3.00E-20 | Aminopeptidase M1 |
| trEMBL | tr|V4P368|V4P368_EUTSA | 4.00E-19 | Uncharacterized protein {ECO:0000313|EMBL:ESQ53846.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00107 | 187520 | 187822 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 49.835 |
| SRR1783600 | control | 50.737 |
| SRR1783602 | moderate drought stress | 41.659 |
| SRR1811619 | moderate drought stress | 40.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.521 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.260 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 27.940 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 31.016 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.861 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.159 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.845 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 30.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 68.640 |
| SRR2868004 | Drought Stress (root) | 60.698 |
| SRR2967015 | Control (root) | 62.313 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.546 |
| SRR9715740 | Leaf | 7.668 |
| SRR9715741 | Leaf | 19.497 |
| SRR9715739 | Root | 13.689 |
| SRR9715742 | Root | 38.537 |
| SRR9715743 | Root | 34.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.415 |
| SRR8749028 | MeJA induced 9h | 60.712 |
| SRR8749029 | MeJA induced 9h | 8.040 |
| SRR8749030 | Uninduced | 9.250 |
| SRR8749031 | Uninduced | 7.820 |
| SRR8749032 | Uninduced | 5.694 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 34.810 |
| SRR8400027 | Control - Root | 35.729 |