Gene detail

Gene detail information of Glyur000107s00007217

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT4G33200.1	myosin, putative
NR	KEH35883.1	myosin family XI heavy chain [Medicago truncatula]
Swissprot	tr\|Q0WPU1\|MYO15_ARATH	Myosin-15
trEMBL	tr\|A0A072V3H1\|A0A072V3H1_MEDTR	Myosin family XI heavy chain {ECO:0000313\|EMBL:KEH35883.1}

Sequence

Transcript Sequence

>Glyur000107s00007217.1
TTCGAATTCTTCACCTTGCCTCATTTGCAGGAACTCACCATGAATCTGCGCAAGGGCTCCAAAGTTTGGGTCCCTGACAGAGATTTGGCTTGGGTGCCTGCTGAAGTTCTCGAATCCGCCGGAAAACAAGTTCGCCTTGTAACTGCTTCTGGCAAGAATCAGGTTCTTGCTCTTCCGGAGAAACTGTTTCCGAGGGACGCGGATGAAGATGAGCATGGTGGAGTCGAAGATATGACGAGGTTGGCTTACTTGAATGAGCCAGGGGTGTTGTACAATCTCCGGAGAAGATATGCGCTGAATGATATTTATACATACACGGGGAGCATTTTAATAGCAGTTAATCCATTCACAAAGCTTCCACATTTGTATGATACCCATATGATGGAGCANTATAAGGGAGCTCCATTTGGTGAGCTCAGTCCACATGTATTTGCTGTTGCCGATGCATCTTATAGAGCAATGATGAACGAAGGTCGAAGCCAATCTATCTTGGTCAGTGGTGAAAGTGGTGCTGGGAAAACCGAGACAACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGGCGTNCTGCTTGTGACGATAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCACTTTTAGAGGCATTTGGCAATGCAAGGACTGTTAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAGTGGTAAAATATCTGGTGCCGCAATTAGAACTTACTTACTGGAAAGATCACGAGTAGTGCAGACAACGGATCCAGAAAGAAATTATCACTGCTTTTATCAATTGTGTGCATCTGAAAGGGATGCAGAGAAGTATAGGCTAGGACATCCAAGCCACTTCCACTATTTAAATCAAAGTAAAGTTTATGAATTAGATGGGGTAAGCAGTGCAGAAGAATACATAAAGACACGGAGAGCAATGGATATTGTTGGCATAAGTCATGAGGAACAGGAAGNCATATTTTGCACCTTAGCTGCAATTTTACATTTAGGGAATGTTGAATTTTCTCCTGGGAAAGAGCATGACTCATCAGTAATAAAGGATGAGAAGTGTGATCTGAACCTACTGTTAGCAACATTATGTACCCGTTCAATACAAACCCGAGAAGGAAATATAATCAAAGCTCTTGATTGTAATGCTGCTGTTGCTGGCCGGGATGCCTTGGCAAAAACTGTATATGCTCGTTTGTTTGATTGGCTTGTTGATAAGGTCAATAGGTCCGTTGGGCAAGATGTCAATTCCCAGATGCAAATTGGAATATTAGATATATATGGTTTTGAGTGCTTTAAGGTTAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAACAACATTTTAATGAGCATGTATTCAAGATGGAGCAAGAAGAGTATAGCAAAGAAGAAATTAACTGGAGTTACATTGAATTTATAGACAACCAAGATGTTTTAGATTTGATTGAAAAGAAACCCATTGGTATCATTGCTTTGTTAGATGAAGCTTGCATGTTTCCGAAATCGACACATGGAACATTCTCAACCAAGTTATTTCAGCACTTCTTGTCCCACCCTCGGTTAGAAAAGGAGAAGTTTTCAGAAACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTTACTTACCATACAGACACATTTTTAGACAAAAACCGTGATTATGTAGTTGTAGANCATTGCAGTCTATTATCTTCTTCAAAATGTCCCTTTGTGTCGGATCTTTTTCCTTTGTTACCAGAGGAATCTTCAAGGTCATCATACAAGTTTTCTTCTGTGGCCTCCAGATTTAAGCAACAACTTCAAGCACTTATGGAAACACTTAATACAACAGAGCCTCATTATGTTCGATGTGTCAAGCCAAATTCTTTGAATCTACCACAAAAGTTTGAGAATACAAGTGTCATACATCAACTACGCTGCGGGGGTGTCCTTGAGGCTGTTCGGATAAGTCTGGCAGGTTACCCAACTCGAAGGACTTACTCAGAGTTTGTAGATCGCTTTGGATTAATAGCTCCTGAATTTATGGATGGAAGTTACGATGATAGAGCTGCAACTCAGAAAATATTGCAAAAGCTAAAGCTTGAGAATTTTCAGTTGGGTAGGACTAAAGTGTTTCTCAGGGCTGGTCAAATTGGCATTTTAGACTCTAGGCGTGCAGAAGTTTTGGACAATGCTGCAAAGTGTATTCAGCGTCGACTGCATACATTTATTGCGCGCAGGGATTTCATGTCAATCCGAGCTGCTGCAATTTTGCTTCAAGCATGCTGCAGGGTTCTTGTTTCTGAAGGATGCCTTATACGGAAGATATATGTTTCTAAAAGGGAGACTGCAGCAGCTATCTCCATTCAGAAATATATTCGTATGCGTCTGATGAGGCATGCATATGTGACACTATATTCTTCTGCTATTATCATACAATCCAATGTTCGTGGTTTCACATCTCGCCAACGATTCTTGTATAGAAAAGAACATAAAGCTGCTACTTTTCTTCAGGCCTGTTGGAGGATGTGCAAGGTTCGGTCTGCTTTCCAACAACATCAAGCTTCAATTGTGGCAATACAATGTCTTTGGCGGTGTAGACAAGCAAAAAGAGAGCTTCGCAGACTTAAACAAGAGGCTAATGAAGCTGGTGCCCTGCGTTTAGCAAAGAATAAACTTGAGAAACAATTGGAGGAGCTCACATGGCGTTTGCATCTTGAAAAAAAAATACGGGTGTCTAATGAAGAGGCTAAGCAGGTTGAGATTTCCAAATTTCAGAAGCAATTAGAAGCTCTGAATCGTGAATTAGATGCAGCTAAATTGACAACAATAAATGAGTCGAATAAGAATGCAATTTTGCAAAATCAGTTGCAATTGTCAGTAAAGGAAAAATCTGCTTTAGAAAGAGAGCTAGTTGCGATGAATGAAGTGCAAAAGGAAAATGCTTTGTTGAAGGGTTCTTTGGATGCCTTTGAAAAGAAGAGCACAGCTTTGGAGCTTGAGCTTGTGAATGCTCAAAAAAACCATAATGAAACCATTCAGAAAATGAGTGAGTTTGAACAAAAGTGTTCTCAACTTGCACAGAATGTGAAAAGTCTTGAAGAAAAGCTATTGAGTTTGGAGGATGAAAATCGTGTGCTTCGTCAGAAAGCCTTAAGTGTATCTCCTAAGAGCAATCGTCCAGGTTTTGCAAAGTCATCGTCAGAAAAATACTCAAGTGCAATAGTGCCCCGCACTGAGCGAAAACCAATGTTTGAATCACCCACACCTACAAAACTTATTACCTCTTTTACACATGGCTTGTCAGACTCTCGTCGATCTAAATTAACAGCAGAGAGGCAGTGGCACCAGGCATCTCTCTTGTTTCACTTGTTCCTAAATCCTGCATCTCTAGATAACTACGAATTCCTCACTAGGTGTATCAAAGAGGATTTGGGGTTCAAAAATGGTAAACCTGTGGCAGCTAGTATCATATACAAATGTCTTTTTCATTGGCATGCCTTTGAATCTGAGCGCACGGCCATATTTGATTACATAATTGATGGGATTAATGAATTAATAAAGATTAGAGATGACGACATTGTCTTGCCATATTGGTTGTCCAATACGTCCGCACTTCTGTGCCTCTTGCAGAGGAACTTGCGTTCAAATGGTTTTTTGATTACCGCTGCTCAACGTTATTCCGGATCATCGGGCTTGACCAGCCGGATAGGGCATGGTCTCCACAAGCAGAAGGCTGATAATGATTACAACTTTCACGGCACATTTGAAATTCATATTGTTAAAATGGTTTGGCCCAAAGATTTTGCATTTTACACCAGTAGTTGTGGGTCTCCCAGCCCCTGCTTTCTTTATCTTCCTCTTGATTTAGTTTGTTGCTATTTCCAGGGATTGAAGTCTCCATTGAAGTTAATTGGATATAACGATGGTACGTCACATGTGGAGGCTAGATATCCAGCTATACTTTTTAAACAACAACTAACTGCTTGTGTTGAGAAGATTTTTGGCCTTATACGTGATAATTTGAAAAAGGAACTTTGTCCACTTCTGGGATCATGTATTCAGGCACCCAAAACAGGACGAGTGCAAGGTGGGAAATCATCTAGATCTCCTGGGGGGCTTCCTCAACAATCACCTGGTGGTCAATGGGACAACATCATCAAATTTTTGGATTCACTCGTGAACCAATTATGTGCAAATCATGTACCATCCTTCTTCATTCGCAAGCTAGTTACACAGGTTTTTTCCTTCATCAATATTACGCTCTTCAACAGTCTTCTGTTGCGGCGTGAATGTTGTACTTTCTCAAATGGTGAATATGTAAAGTCTGGTCTCGCAGAATTGGAGAAATGGATAGTTAATGCAAATGAGGAGTATGCAGGAACATCCTGGCACGAGCTGAATTATATAAGACAAGCTGTTGGGTTTCTGGTGATACATCAGAAGAGGAAGAAATCTTTGGAAGAAATTCGGCAGGATCTTTGTCCGGCATTAACGGTGAGGCAAATCTATCGAATTAGTACTATGTACTGGGACGACAAGTATGGAACCCAGAGTGTGTCCAACGAGGCAAGTTGTGTAGTTAGTGAAATGAGGGAAATCGTGAGCAAGGACAATCAGAGTTTGACCTCAAATTCGTTCTTGCTGGATGATGATATGAGCATTCCTTTTTCTGCTGAAGACATAGATATGGCAATCCCTGCTATAAATACTGATGATGTTGNGCTCCCAGCATTATTGTGTGAATATCCTTGTGCCCAGTTTCTTGTTTTACGTGAGTAATTGATTTACAATCACAAGGTCGATACTGAAGCTTTACACCTAGCTTTAGGATTTGATCTCTAGAATATGGCAATGCAACCCAGTCGGAAGTGTTTCTCTTCACGTCGTCGACAGCAATCTTAGTTGTCTTCAGATTTTATGGCTCTCTTCACTTTATTTGCTAATCAGGGTATTAATCACCAATCGGAGATGGAAGAATGGTTCTCTTGGTTTGATTGTAATTTCTCCCTAAATTACATAGTTAAACCAACAATTTGTAATTATCCAAGGGTAGATGACACGGTCTAGGCTTCACGTGCTGCTGCTATTATTATGCAGCTCATCTTTCTCAGGTGTATTTATTATCATAAGCTTTCCTGTTGTACTCTATGTAGGTATGCAATTGTAATCAGAGTCTTGGCTAAAGAAATCAAATGTATTATTCATCGATGTAAATACTGAACTTCGCCCTTCGGAGTTAAAATTTATTTATTGTAACTTTTTTAACCTCACATTGAGTGCGGTGCTGGTGTTACCCCATTTGTTTGAAACTTGG

Protein Sequence

>Glyur000107s00007217.1
FEFFTLPHLQELTMNLRKGSKVWVPDRDLAWVPAEVLESAGKQVRLVTASGKNQVLALPEKLFPRDADEDEHGGVEDMTRLAYLNEPGVLYNLRRRYALNDIYTYTGSILIAVNPFTKLPHLYDTHMMEXYKGAPFGELSPHVFAVADASYRAMMNEGRSQSILVSGESGAGKTETTKLIMQYLTFVGGRXACDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSSGKISGAAIRTYLLERSRVVQTTDPERNYHCFYQLCASERDAEKYRLGHPSHFHYLNQSKVYELDGVSSAEEYIKTRRAMDIVGISHEEQEXIFCTLAAILHLGNVEFSPGKEHDSSVIKDEKCDLNLLLATLCTRSIQTREGNIIKALDCNAAVAGRDALAKTVYARLFDWLVDKVNRSVGQDVNSQMQIGILDIYGFECFKVNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHGTFSTKLFQHFLSHPRLEKEKFSETDFTVSHYAGKVTYHTDTFLDKNRDYVVVXHCSLLSSSKCPFVSDLFPLLPEESSRSSYKFSSVASRFKQQLQALMETLNTTEPHYVRCVKPNSLNLPQKFENTSVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDRAATQKILQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLHTFIARRDFMSIRAAAILLQACCRVLVSEGCLIRKIYVSKRETAAAISIQKYIRMRLMRHAYVTLYSSAIIIQSNVRGFTSRQRFLYRKEHKAATFLQACWRMCKVRSAFQQHQASIVAIQCLWRCRQAKRELRRLKQEANEAGALRLAKNKLEKQLEELTWRLHLEKKIRVSNEEAKQVEISKFQKQLEALNRELDAAKLTTINESNKNAILQNQLQLSVKEKSALERELVAMNEVQKENALLKGSLDAFEKKSTALELELVNAQKNHNETIQKMSEFEQKCSQLAQNVKSLEEKLLSLEDENRVLRQKALSVSPKSNRPGFAKSSSEKYSSAIVPRTERKPMFESPTPTKLITSFTHGLSDSRRSKLTAERQWHQASLLFHLFLNPASLDNYEFLTRCIKEDLGFKNGKPVAASIIYKCLFHWHAFESERTAIFDYIIDGINELIKIRDDDIVLPYWLSNTSALLCLLQRNLRSNGFLITAAQRYSGSSGLTSRIGHGLHKQKADNDYNFHGTFEIHIVKMVWPKDFAFYTSSCGSPSPCFLYLPLDLVCCYFQGLKSPLKLIGYNDGTSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELCPLLGSCIQAPKTGRVQGGKSSRSPGGLPQQSPGGQWDNIIKFLDSLVNQLCANHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNANEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEASCVVSEMREIVSKDNQSLTSNSFLLDDDMSIPFSAEDIDMAIPAINTDDVXLPALLCEYPCAQFLVLRE

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00107	33230	52821	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

cellular_component
GO:0016459 myosin complex

molecular_function

GO:0003774 motor activity

GO:0005515 protein binding

GO:0005524 ATP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000107s00007217.1	PF02736.14	Myosin_N	20	52	1.80E-05
Glyur000107s00007217.1	PF00063.16	Myosin_head	75	718	1.80E-228
Glyur000107s00007217.1	PF00612.22	IQ	787	806	0.014
Glyur000107s00007217.1	PF00612.22	IQ	812	829	0.0047
Glyur000107s00007217.1	PF00612.22	IQ	835	855	0.0029
Glyur000107s00007217.1	PF01843.14	DIL	1413	1519	3.70E-32

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.701
SRR1783600	control	2.729
SRR1783602	moderate drought stress	2.939
SRR1811619	moderate drought stress	3.053

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.792
DRR006520	Root Summer glycyrrhizin high producing strain	2.815
DRR006521	Root Winter glycyrrhizin high producing strain	2.377
DRR006522	Root Winter glycyrrhizin high producing strain	2.389
DRR006523	Root Summer glycyrrhizin low producing strain	3.242
DRR006524	Root Summer glycyrrhizin low producing strain	3.334
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.662
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.695

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	11.850
SRR2868004	Drought Stress (root)	12.408
SRR2967015	Control (root)	13.194

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	7.166
SRR9715740	Leaf	6.598
SRR9715741	Leaf	7.812
SRR9715739	Root	0.613
SRR9715742	Root	2.539
SRR9715743	Root	2.240

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.029
SRR8749028	MeJA induced 9h	25.956
SRR8749029	MeJA induced 9h	15.188
SRR8749030	Uninduced	8.751
SRR8749031	Uninduced	11.941
SRR8749032	Uninduced	8.464

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	13.048
SRR8400027	Control - Root	12.995