Gene detail information of Glyur000107s00007216 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G21940.1 | 2.00E-23 | |
| NR | KHN32165.1 | 1.22E-71 | hypothetical protein glysoja_035258 [Glycine soja] |
| trEMBL | tr|K7KTA6|K7KTA6_SOYBN | 5.00E-72 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G05931.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00107 | 30904 | 32715 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.123 |
| SRR1783600 | control | 1.966 |
| SRR1783602 | moderate drought stress | 11.647 |
| SRR1811619 | moderate drought stress | 10.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.767 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.865 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.741 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.563 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.253 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.204 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.510 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.909 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.099 |
| SRR2868004 | Drought Stress (root) | 61.438 |
| SRR2967015 | Control (root) | 99.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.864 |
| SRR9715740 | Leaf | 4.524 |
| SRR9715741 | Leaf | 4.409 |
| SRR9715739 | Root | 5.061 |
| SRR9715742 | Root | 6.743 |
| SRR9715743 | Root | 5.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.339 |
| SRR8749028 | MeJA induced 9h | 7.265 |
| SRR8749029 | MeJA induced 9h | 3.448 |
| SRR8749030 | Uninduced | 2.001 |
| SRR8749031 | Uninduced | 7.817 |
| SRR8749032 | Uninduced | 14.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 15.768 |
| SRR8400027 | Control - Root | 21.827 |