Gene detail

Gene detail information of Glyur000107s00007213

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G26300.1	2.00E-170	G protein alpha subunit 1
NR	XP_004501424.1	0	PREDICTED: guanine nucleotide-binding protein alpha-2 subunit-like isoform X1 [Cicer arietinum]
Swissprot	tr\|O04279\|GPA2_PEA	0	Guanine nucleotide-binding protein alpha-2 subunit
trEMBL	tr\|I1MX88\|I1MX88_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA17G34450.1}

Sequence

Transcript Sequence

>Glyur000107s00007213.1
CAGAACTTGAATACCACACCACNGAACTTGCCTTTTCAAGTTTCACTTCACAGTTCATTCTCAACGAATCCCCAAANTCCAGGGGCATATTCCAGCTCCATACCTCTGCAAAAGAGAGACCCTTTTGCTTCTTTTTCAGGTGAACTCAAAGCCCACTAATACGGGTATGCATTAGAGAAGGGCATTGAAACACTGATTTCTGGTGGAGCTTGACTAGTACATCTTCTATGCTGTCGTTTGTAACAGAGAATATGGGCTTAATCTGCAGCAAAAATCGTCGTAATAATGATTCTGATGCCGAAGAAAATGCACAGATAAAACTTTTGTTTCAAACTGGCTTTGATGAGGCTGAGCTAAGAAGCTACATACCCNTCATTCATGCTAATGTGTATCAGACAATAAAAGTACTGCATGANGGGTCAAAGGAGTTGGCTCAGAATGATCCTAATTCTTCAAAGTATGTTATATCCAATGAAAACAAGNACATTTGTGAAAAGTTTTCAGAAATTGGAGGCAGGCTGGATTACCCACATCTCACCAAAGATATTGCACAGGAAATAGAGACTCTGTGGANGGATGCTGCCATTCAGGAAACATATGCCCGTGGTAATGAACTCCAAGTGCCAGATTGTACCAAATATTTCATGGAAAATTTGCAGAGGCTGTCTGAAGCGAATTATGTTCCTACAAAGGAGGATGTTTTGTATGCAAGAGTTCGTACAACTGGTGTTGTGGAGATCCAGTTCAGCCCTGTTGGAGAAAATAAAAGAAGTGGTGAAGTCTATAGACTTTTCGATGTTGGTGGCCAGAGAAATGAGAGGAGAAAATGGATCCATCTTTTTGAAGGAGTTACAGCTGTAATATTCTGTGCTGCACTTAGCGAGTATGATCAAACACTTTTTGAGGATGAAAACAAGAATAGAATGATGGAAACTAAGGANCTTTTTGAATGGGTCCTGAAGCAACCATGTTTTGAGAAANCATCCTTCATGTTATTTTTAAACAAGTTTGACATATTCGAGAAGAAGATCCCAGAAGTCCCGCTCAATGTATGTGAATGGTTCAAAGATTACCAGCCAGTTTCAACAGGGAAACAAGAGACTGAGCATGCATATGAGTTTGTGAAGAAAAAGTTTGAGGAATTGTATTTCCAGAGCTCTGCTCCTGACCGTGTAGATCGTGTCTTCAAGATCTACCGGACCACTGCCCTTGATCAGAAGGTTGTGAAGAAGACTTTCAAGCTTGTNGACGAGACATTGAGGCGGAGGAATCTCTTTGAAGCTGGCTTATTGTGACCATTGCAACGGTATGCTNAAGAGGGATACTAAATTTTTACATTGAAGAAGGGATCATCAGATTTTGGGTATATTAGAGGTCAGGTATACAACAGCACATAATCCATTTATTGATTTTACATCAAAGTAAATCCTGTTGAATGGGGGTGGATAGGGAAAGGCCTTTCTGAATACTTGATCACCGTGCTGAAGTTTTCAGAGATGACATCATGTTTTGTGATTCAATTTTTATTGATTGAAACTCACCAATGATATATTTCATATCCGTTATTTATGTTTGTTAAATATTAATGAGGTTTTGCCCATGTTACTCTGTGTTGGTGTGCATGCTTTTGAAGCTGTTAGTTTGCTTTGTGCCTGCAGTGCAACACTATTGTGTATGTATATAGAGAAAAGCTGTTTGGTATGAAACGAAGGATGCACCAATGACGTGTCCTATGTTCTGCCAAAACCATATCTCATTTTTTTTAGTTAATTTTATTATTAAAAAAAATAAGAAAGCCACATATTCATGCTNTATTCGTGCAAAT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00107	18190	23955	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0007165 signal transduction

GO:0007186 G-protein coupled receptor signaling pathway

molecular_function

GO:0003924 GTPase activity

GO:0004871 signal transducer activity

GO:0005525 GTP binding

GO:0019001 guanyl nucleotide binding

GO:0031683 G-protein beta/gamma-subunit complex binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000107s00007213.1	PF00503.15	G-alpha	29	343	1.20E-89

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.285
SRR1783600	control	3.415
SRR1783602	moderate drought stress	4.269
SRR1811619	moderate drought stress	3.599

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	7.690
DRR006520	Root Summer glycyrrhizin high producing strain	5.554
DRR006521	Root Winter glycyrrhizin high producing strain	1.407
DRR006522	Root Winter glycyrrhizin high producing strain	1.353
DRR006523	Root Summer glycyrrhizin low producing strain	9.026
DRR006524	Root Summer glycyrrhizin low producing strain	9.045
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.205
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.402

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	17.282
SRR2868004	Drought Stress (root)	16.654
SRR2967015	Control (root)	15.375

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.996
SRR9715740	Leaf	4.755
SRR9715741	Leaf	4.461
SRR9715739	Root	0.802
SRR9715742	Root	2.851
SRR9715743	Root	3.270

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	4.216
SRR8749028	MeJA induced 9h	2.568
SRR8749029	MeJA induced 9h	2.145
SRR8749030	Uninduced	0.225
SRR8749031	Uninduced	0.244
SRR8749032	Uninduced	0.401

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.629
SRR8400027	Control - Root	14.682