Gene detail

Gene detail information of Glyur000107s00007211

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G21950.1	2.00E-94	alpha/beta-Hydrolases superfamily protein
NR	XP_003522308.1	5.80E-170	PREDICTED: monoacylglycerol lipase ABHD6 [Glycine max]
COG	YP_132656.1	2.00E-34	hypothetical protein PBPRB0984 [Photobacterium profundum SS9]
trEMBL	tr\|I1JU24\|I1JU24_SOYBN	2.00E-170	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA04G05970.1}

Sequence

Transcript Sequence

>Glyur000107s00007211.1
GTACGAATTGAGGATGTTGAATTGAACAGAGATCTGCTCTTATATCGGGAAAAAAGAAAACCGTTGCAACTCATTTTCTTTGCATTCCAAAGCGACAGCAAATTATTTTCACACAACAGAATCTTTGCGACCATTTTATTTTTTTATTTTTTTATGAATAGAATCTTTGTGACCTTCTCCTAACAAGTTAATTCACACTCGCACCACATCCCTCAAGAACCAACAATACTGCATCCATTCTTGGTTTTTCAATGCTGGTGTGGTGAGTTCGTGATCTCTACTATTGGCGTTTGCGGTAATTTCCGGCATAACATCCCATGCCCCAATAATTAACCTCATAAACACCATGCTTCCGTCGTTTGTGAGCATCGCCTCCCTATACGGCGGCTACCTCCGCCGCTGTTTCACGGGAGCAGGACTGTCCTCGCAATTCATGGACGTGGACGACAAAACCACCCTCCACTTTTGGGGCCCAACAAAGCAAGCCACCGAAAAGCCTTCCCTCGTTCTGATCCACGGGTTTGGGCCCGAGGCCATATGGCAGTGGCGAAAACAGGCCCAATTCCTGGCCCCTCACTTCAACGTGTACGTCCCCGACCTAGTATTCTTCGGAGACTCCACGACCAGGTCATGCGAGAGGAGCGAGAGGTTTCAGGCAGCGTCGGTGGGGAAACTGATGGACAAGTTAGGGGTGGAGAGGTTCCACGTGGCGGGAACCAGCTACGGTGGATTCGTGGCTTATCATTTGGCCAGCGCGTTGGGGGAAGAGAGGGTGCAGAAAGTGGTGATTGCTAGCTCCGGTGTTAACATGAGGAAGNGTGACAACGTGGCACTGTTGCGAAGGGCTCAACTCGAAAAAATTGAGGATCTCATGTTGCCTGCTACTCCCCAACATTTGCGGAAATTGATGTCCCTCGCGGTGCACAAAACTACCCATTTTTTGCCCAATTTTTTCTTGAACGACTTCATCAATAAATTATACTCAGAAAATAGGAAGGAAAAGATGGAGCTTCTAAAAGGCATATCCCTTGGAAGGGATGATACTTCGAACATTTCGCCTCTTCAACAGGAGGTTCTCATAATCTGGGGGGAACATGACCGGATATTTCCCGTGCAGTTGGCCAATGAACTGAAAGGGGTAATCGGTAAGAAGGCAAGATTAGAATTGATAAAGGATGCATCCCATGTGCCTCAAACTGAAAAGCCAGAAGAATTCAACAGCATTATCCTAAATTTCTTGCACGCGTGTTCTTGAATATTTTTTATGAGTACT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00107	11416	13708	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000107s00007211.1	PF12697.2	Abhydrolase_6	53	291	1.20E-32

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.030
SRR1783600	control	7.183
SRR1783602	moderate drought stress	4.934
SRR1811619	moderate drought stress	5.052

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.209
DRR006520	Root Summer glycyrrhizin high producing strain	2.124
DRR006521	Root Winter glycyrrhizin high producing strain	1.658
DRR006522	Root Winter glycyrrhizin high producing strain	1.472
DRR006523	Root Summer glycyrrhizin low producing strain	2.792
DRR006524	Root Summer glycyrrhizin low producing strain	2.694
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.484
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.639

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.675
SRR2868004	Drought Stress (root)	15.025
SRR2967015	Control (root)	15.397

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.252
SRR9715740	Leaf	8.501
SRR9715741	Leaf	6.057
SRR9715739	Root	6.522
SRR9715742	Root	6.178
SRR9715743	Root	6.192

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.045
SRR8749028	MeJA induced 9h	0.268
SRR8749029	MeJA induced 9h	0.372
SRR8749030	Uninduced	2.145
SRR8749031	Uninduced	1.083
SRR8749032	Uninduced	0.759

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	25.774
SRR8400027	Control - Root	22.837