Gene detail information of Glyur000106s00011746 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G60710.1 | 8.00E-58 | NAD(P)-linked oxidoreductase superfamily protein |
| NR | XP_003621685.1 | 2.66E-83 | Aldo-keto reductase yakc [Medicago truncatula] |
| COG | YP_523693.1 | 5.00E-44 | aldo/keto reductase [Albidiferax ferrireducens T118] |
| Swissprot | tr|P49249|IN22_MAIZE | 1.00E-73 | IN2-2 protein |
| trEMBL | tr|I3S085|I3S085_MEDTR | 2.00E-83 | Uncharacterized protein {ECO:0000313|EMBL:AFK33677.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00106 | 340393 | 340961 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000106s00011746.1 | PF00248.16 | Aldo_ket_red | 20 | 139 | 6.10E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.041 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.373 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.486 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 51.928 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 50.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.191 |
| SRR2868004 | Drought Stress (root) | 0.270 |
| SRR2967015 | Control (root) | 0.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.434 |
| SRR9715740 | Leaf | 1.266 |
| SRR9715741 | Leaf | 3.724 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.102 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.103 |
| SRR8749030 | Uninduced | 0.034 |
| SRR8749031 | Uninduced | 0.073 |
| SRR8749032 | Uninduced | 0.055 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.355 |
| SRR8400027 | Control - Root | 0.350 |