Gene detail information of Glyur000105s00014215 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30540.1 | 8.00E-41 | Thioredoxin superfamily protein |
| NR | KEH43252.1 | 2.32E-57 | monothiol glutaredoxin-S2 protein [Medicago truncatula] |
| COG | YP_001527212.1 | 2.00E-07 | glutaredoxin [Azorhizobium caulinodans ORS 571] |
| Swissprot | tr|O04341|GRXS9_ARATH | 1.00E-51 | Monothiol glutaredoxin-S9 |
| trEMBL | tr|A0A072VN37|A0A072VN37_MEDTR | 9.00E-58 | Monothiol glutaredoxin-S2 protein {ECO:0000313|EMBL:KEH43252.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00105 | 345626 | 350054 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000105s00014215.1 | PF00462.19 | Glutaredoxin | 22 | 84 | 1.80E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.078 |
| SRR1783600 | control | 0.079 |
| SRR1783602 | moderate drought stress | 0.108 |
| SRR1811619 | moderate drought stress | 0.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.851 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.829 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.034 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.030 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.041 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 78.880 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 76.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.400 |
| SRR2868004 | Drought Stress (root) | 11.018 |
| SRR2967015 | Control (root) | 13.344 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 19.856 |
| SRR9715740 | Leaf | 24.036 |
| SRR9715741 | Leaf | 17.389 |
| SRR9715739 | Root | 1.744 |
| SRR9715742 | Root | 1.695 |
| SRR9715743 | Root | 1.475 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.075 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.761 |
| SRR8400027 | Control - Root | 33.076 |