Gene detail information of Glyur000105s00014213 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G62930.1 | 2.00E-37 | Thioredoxin superfamily protein |
| NR | XP_006575105.1 | 9.76E-58 | PREDICTED: monothiol glutaredoxin-S6-like [Glycine max] |
| COG | YP_004179299.1 | 1.00E-07 | glutaredoxin [Isosphaera pallida ATCC 43644] |
| Swissprot | tr|Q9LYC8|GRXS6_ARATH | 3.00E-47 | Monothiol glutaredoxin-S6 |
| trEMBL | tr|I1JFG6|I1JFG6_SOYBN | 4.00E-58 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G17210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00105 | 335149 | 335457 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000105s00014213.1 | PF00462.19 | Glutaredoxin | 13 | 75 | 2.30E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.098 |
| SRR1783600 | control | 1.352 |
| SRR1783602 | moderate drought stress | 12.490 |
| SRR1811619 | moderate drought stress | 13.078 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.647 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.407 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.107 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.640 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.506 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 16.286 |
| SRR9715740 | Leaf | 12.798 |
| SRR9715741 | Leaf | 21.656 |
| SRR9715739 | Root | 1.088 |
| SRR9715742 | Root | 190.803 |
| SRR9715743 | Root | 145.757 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.032 |
| SRR8400027 | Control - Root | 0.045 |