Gene detail information of Glyur000105s00014211 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G03020.1 | 2.00E-33 | Thioredoxin superfamily protein |
| NR | XP_004496051.1 | 7.12E-55 | PREDICTED: monothiol glutaredoxin-S6-like [Cicer arietinum] |
| COG | YP_003952551.1 | 1.00E-08 | glutaredoxin [Stigmatella aurantiaca DW4/3-1] |
| Swissprot | tr|Q9SA68|GRXS1_ARATH | 3.00E-42 | Monothiol glutaredoxin-S1 |
| trEMBL | tr|I1L7X6|I1L7X6_SOYBN | 4.00E-56 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G02570.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00105 | 328425 | 328742 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000105s00014211.1 | PF00462.19 | Glutaredoxin | 13 | 75 | 3.10E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.892 |
| SRR1783600 | control | 0.682 |
| SRR1783602 | moderate drought stress | 5.050 |
| SRR1811619 | moderate drought stress | 4.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 32.731 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 32.840 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.795 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.860 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.003 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.432 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.212 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.209 |
| SRR9715740 | Leaf | 0.415 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 5.045 |
| SRR9715742 | Root | 17.478 |
| SRR9715743 | Root | 14.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.218 |
| SRR8749028 | MeJA induced 9h | 0.491 |
| SRR8749029 | MeJA induced 9h | 0.516 |
| SRR8749030 | Uninduced | 0.886 |
| SRR8749031 | Uninduced | 0.143 |
| SRR8749032 | Uninduced | 1.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.000 |