Gene detail information of Glyur000105s00014189 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G54200.1 | 2.00E-12 | |
| NR | XP_004498853.1 | 1.09E-69 | PREDICTED: uncharacterized protein LOC101493840 [Cicer arietinum] |
| trEMBL | tr|A0A072VD40|A0A072VD40_MEDTR | 2.00E-64 | Uncharacterized protein {ECO:0000313|EMBL:KEH39914.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00105 | 127321 | 128481 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 41.695 |
| SRR1783600 | control | 41.926 |
| SRR1783602 | moderate drought stress | 39.540 |
| SRR1811619 | moderate drought stress | 39.042 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.194 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.204 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.692 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.557 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.163 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.639 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.250 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.435 |
| SRR2868004 | Drought Stress (root) | 6.125 |
| SRR2967015 | Control (root) | 3.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.674 |
| SRR9715740 | Leaf | 2.113 |
| SRR9715741 | Leaf | 2.678 |
| SRR9715739 | Root | 20.459 |
| SRR9715742 | Root | 44.908 |
| SRR9715743 | Root | 40.856 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.662 |
| SRR8749028 | MeJA induced 9h | 0.985 |
| SRR8749029 | MeJA induced 9h | 0.709 |
| SRR8749030 | Uninduced | 1.438 |
| SRR8749031 | Uninduced | 0.474 |
| SRR8749032 | Uninduced | 0.682 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 18.526 |
| SRR8400027 | Control - Root | 24.066 |