Gene detail information of Glyur000105s00014183 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G26170.1 | 4.00E-13 | WRKY DNA-binding protein 50 |
| NR | XP_003588914.1 | 8.69E-33 | WRKY transcription factor [Medicago truncatula] |
| Swissprot | tr|Q8VWQ5|WRK50_ARATH | 2.00E-15 | Probable WRKY transcription factor 50 |
| trEMBL | tr|G7I8Z5|G7I8Z5_MEDTR | 3.00E-33 | WRKY family transcription factor {ECO:0000313|EMBL:AES59165.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00105 | 97039 | 99778 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | WRKY |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000105s00014183.1 | PF03106.10 | WRKY | 83 | 124 | 1.00E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.563 |
| SRR1783600 | control | 1.255 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.581 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.296 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.080 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.822 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.262 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.137 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.706 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.417 |
| SRR2868004 | Drought Stress (root) | 1.502 |
| SRR2967015 | Control (root) | 0.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.158 |
| SRR9715740 | Leaf | 4.912 |
| SRR9715741 | Leaf | 10.663 |
| SRR9715739 | Root | 0.249 |
| SRR9715742 | Root | 1.812 |
| SRR9715743 | Root | 0.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.733 |
| SRR8749028 | MeJA induced 9h | 6.015 |
| SRR8749029 | MeJA induced 9h | 1.545 |
| SRR8749030 | Uninduced | 0.841 |
| SRR8749031 | Uninduced | 4.502 |
| SRR8749032 | Uninduced | 2.044 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.150 |
| SRR8400027 | Control - Root | 0.372 |