Gene detail information of Glyur000105s00014171 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G72510.2 | 5.00E-21 | Protein of unknown function (DUF1677) |
| NR | XP_004498835.1 | 9.48E-76 | PREDICTED: uncharacterized protein LOC101488315 [Cicer arietinum] |
| trEMBL | tr|I1MX12|I1MX12_SOYBN | 1.00E-67 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G33500.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00105 | 33363 | 33818 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000105s00014171.1 | PF07911.8 | DUF1677 | 20 | 114 | 8.60E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.068 |
| SRR1783600 | control | 5.365 |
| SRR1783602 | moderate drought stress | 4.890 |
| SRR1811619 | moderate drought stress | 5.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 17.407 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.125 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 11.887 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 11.306 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.455 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.636 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 33.042 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 32.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.640 |
| SRR2868004 | Drought Stress (root) | 12.578 |
| SRR2967015 | Control (root) | 22.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 37.698 |
| SRR9715740 | Leaf | 72.274 |
| SRR9715741 | Leaf | 69.336 |
| SRR9715739 | Root | 8.771 |
| SRR9715742 | Root | 5.340 |
| SRR9715743 | Root | 6.853 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.170 |
| SRR8749028 | MeJA induced 9h | 0.940 |
| SRR8749029 | MeJA induced 9h | 1.079 |
| SRR8749030 | Uninduced | 0.077 |
| SRR8749031 | Uninduced | 0.420 |
| SRR8749032 | Uninduced | 0.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 23.995 |
| SRR8400027 | Control - Root | 16.171 |