Gene detail information of Glyur000104s00006040 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27290.1 | 1.00E-52 | Protein of unknown function (DUF1279) |
| NR | KHN19913.1 | 1.49E-100 | Protein FAM210B [Glycine soja] |
| trEMBL | tr|I1LKN2|I1LKN2_SOYBN | 6.00E-101 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G18410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00104 | 339585 | 341432 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000104s00006040.1 | PF06916.8 | DUF1279 | 96 | 177 | 1.40E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.010 |
| SRR1783600 | control | 18.012 |
| SRR1783602 | moderate drought stress | 17.620 |
| SRR1811619 | moderate drought stress | 17.364 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.321 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.835 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 54.556 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 53.783 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 35.702 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 35.936 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 176.202 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 174.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.555 |
| SRR2868004 | Drought Stress (root) | 21.708 |
| SRR2967015 | Control (root) | 25.096 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 234.830 |
| SRR9715740 | Leaf | 389.365 |
| SRR9715741 | Leaf | 214.870 |
| SRR9715739 | Root | 10.732 |
| SRR9715742 | Root | 14.071 |
| SRR9715743 | Root | 15.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.009 |
| SRR8749028 | MeJA induced 9h | 22.280 |
| SRR8749029 | MeJA induced 9h | 27.252 |
| SRR8749030 | Uninduced | 17.970 |
| SRR8749031 | Uninduced | 8.969 |
| SRR8749032 | Uninduced | 22.620 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.599 |
| SRR8400027 | Control - Root | 34.984 |