Gene detail information of Glyur000104s00006039.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G52525.1 | 6.00E-18 | ovate family protein 6 |
| NR | XP_004506212.1 | 5.87E-68 | PREDICTED: uncharacterized protein LOC101503098 [Cicer arietinum] |
| Swissprot | tr|Q3EAL1|OFP6_ARATH | 1.00E-21 | Transcription repressor OFP6 |
| trEMBL | tr|I1LKN3|I1LKN3_SOYBN | 3.00E-68 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G18420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00104 | 335696 | 336301 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | OFP |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000104s00006039.1 | PF04844.8 | Ovate | 114 | 171 | 2.90E-23 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.573 |
| SRR1783600 | control | 0.576 |
| SRR1783602 | moderate drought stress | 0.282 |
| SRR1811619 | moderate drought stress | 0.318 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.409 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.316 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.778 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.878 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.222 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.377 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.387 |
| SRR2868004 | Drought Stress (root) | 2.756 |
| SRR2967015 | Control (root) | 1.638 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.164 |
| SRR9715740 | Leaf | 0.379 |
| SRR9715741 | Leaf | 0.102 |
| SRR9715739 | Root | 0.184 |
| SRR9715742 | Root | 3.151 |
| SRR9715743 | Root | 2.040 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.208 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.888 |
| SRR8749031 | Uninduced | 0.488 |
| SRR8749032 | Uninduced | 0.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.595 |
| SRR8400027 | Control - Root | 4.878 |