Gene detail information of Glyur000104s00006033 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22280.1 | 2.00E-15 | |
| NR | NP_001235413.1 | 1.18E-46 | uncharacterized protein LOC100500255 precursor [Glycine max] |
| trEMBL | tr|C6T159|C6T159_SOYBN | 4.00E-47 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G31220.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00104 | 318532 | 320833 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 35.226 |
| SRR1783600 | control | 35.553 |
| SRR1783602 | moderate drought stress | 26.895 |
| SRR1811619 | moderate drought stress | 26.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 37.873 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.035 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.595 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 28.984 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.189 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.282 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.886 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.913 |
| SRR2868004 | Drought Stress (root) | 22.309 |
| SRR2967015 | Control (root) | 24.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.202 |
| SRR9715740 | Leaf | 10.845 |
| SRR9715741 | Leaf | 16.718 |
| SRR9715739 | Root | 4.353 |
| SRR9715742 | Root | 10.261 |
| SRR9715743 | Root | 7.846 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 78.564 |
| SRR8749028 | MeJA induced 9h | 59.250 |
| SRR8749029 | MeJA induced 9h | 71.744 |
| SRR8749030 | Uninduced | 44.403 |
| SRR8749031 | Uninduced | 43.316 |
| SRR8749032 | Uninduced | 41.616 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 27.455 |
| SRR8400027 | Control - Root | 27.155 |