Gene detail information of Glyur000104s00006030 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G11590.1 | 1.00E-72 | |
| NR | XP_007132469.1 | 0 | hypothetical protein PHAVU_011G096600g [Phaseolus vulgaris] |
| Swissprot | tr|Q66GQ2|Y5162_ARATH | 1.00E-25 | Uncharacterized protein At5g41620 |
| trEMBL | tr|V7AHW0|V7AHW0_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW04463.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00104 | 304345 | 308014 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.045 |
| SRR1783600 | control | 6.101 |
| SRR1783602 | moderate drought stress | 5.889 |
| SRR1811619 | moderate drought stress | 5.896 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.004 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.009 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.117 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.091 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.233 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.253 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.494 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.334 |
| SRR2868004 | Drought Stress (root) | 16.655 |
| SRR2967015 | Control (root) | 15.348 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.819 |
| SRR9715740 | Leaf | 1.948 |
| SRR9715741 | Leaf | 3.495 |
| SRR9715739 | Root | 0.486 |
| SRR9715742 | Root | 4.731 |
| SRR9715743 | Root | 3.663 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 15.310 |
| SRR8749028 | MeJA induced 9h | 13.978 |
| SRR8749029 | MeJA induced 9h | 10.467 |
| SRR8749030 | Uninduced | 6.202 |
| SRR8749031 | Uninduced | 12.225 |
| SRR8749032 | Uninduced | 7.707 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.839 |
| SRR8400027 | Control - Root | 10.414 |