Gene detail information of Glyur000104s00006022 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22340.1 | 7.00E-90 | |
| NR | KHN38613.1 | 1.25E-157 | hypothetical protein glysoja_008162 [Glycine soja] |
| trEMBL | tr|I1LRI8|I1LRI8_SOYBN | 2.00E-157 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G09720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00104 | 275165 | 279568 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.394 |
| SRR1783600 | control | 5.654 |
| SRR1783602 | moderate drought stress | 5.041 |
| SRR1811619 | moderate drought stress | 5.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.229 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.857 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.879 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.711 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.175 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.668 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 15.632 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 14.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.833 |
| SRR2868004 | Drought Stress (root) | 7.076 |
| SRR2967015 | Control (root) | 6.359 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.120 |
| SRR9715740 | Leaf | 21.473 |
| SRR9715741 | Leaf | 11.597 |
| SRR9715739 | Root | 1.103 |
| SRR9715742 | Root | 3.113 |
| SRR9715743 | Root | 3.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.270 |
| SRR8749028 | MeJA induced 9h | 8.811 |
| SRR8749029 | MeJA induced 9h | 6.667 |
| SRR8749030 | Uninduced | 5.710 |
| SRR8749031 | Uninduced | 4.450 |
| SRR8749032 | Uninduced | 5.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.627 |
| SRR8400027 | Control - Root | 11.093 |