Gene detail information of Glyur000104s00006007 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27730.1 | 6.00E-13 | copper ion binding |
| NR | KHN21158.1 | 5.26E-65 | Hypothetical protein glysoja_006637 [Glycine soja] |
| Swissprot | tr|Q9ZUX4|UMP2_ARATH | 7.00E-25 | Uncharacterized protein At2g27730, mitochondrial |
| trEMBL | tr|I1LRH8|I1LRH8_SOYBN | 2.00E-65 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G09600.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00104 | 214858 | 218660 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.424 |
| SRR1783600 | control | 17.201 |
| SRR1783602 | moderate drought stress | 13.593 |
| SRR1811619 | moderate drought stress | 13.824 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.578 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.423 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.451 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.354 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 12.895 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 12.333 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 26.312 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 25.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 56.464 |
| SRR2868004 | Drought Stress (root) | 43.586 |
| SRR2967015 | Control (root) | 37.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 64.344 |
| SRR9715740 | Leaf | 62.048 |
| SRR9715741 | Leaf | 60.484 |
| SRR9715739 | Root | 13.126 |
| SRR9715742 | Root | 24.262 |
| SRR9715743 | Root | 21.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 113.392 |
| SRR8749028 | MeJA induced 9h | 44.236 |
| SRR8749029 | MeJA induced 9h | 90.598 |
| SRR8749030 | Uninduced | 26.042 |
| SRR8749031 | Uninduced | 13.227 |
| SRR8749032 | Uninduced | 29.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 51.570 |
| SRR8400027 | Control - Root | 43.515 |