Gene detail

Gene detail information of Glyur000104s00005988

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G44510.2	4.00E-110	alpha/beta-Hydrolases superfamily protein
NR	XP_004506169.1	0	PREDICTED: uncharacterized protein LOC101515264 isoform X2 [Cicer arietinum]
COG	YP_007054897.1	5.00E-12	alpha/beta hydrolase [Rivularia sp. PCC 7116]
trEMBL	tr\|G7JIH3\|G7JIH3_MEDTR	0	Alpha/beta hydrolase family protein {ECO:0000313\|EMBL:AES88342.2}

Sequence

Transcript Sequence

>Glyur000104s00005988.1
ATGGTTTCAAGAGCAGCAATAGTGTTACTCATGGGTCTTCTGGGAATGGTTTATCAGGCCACTCAACTTCCCCCTCCAACTCCAAACCGTAATGATTCTGATTCATCACCGGATGATAACCATATTCCTGTGGTTTCACCAAGAATCAGACTCAGCGATGGAAGGTACCTGGCTTACAGAGAAAGGGGTGTCCCCAAGGACAGAGCAAAACACAGCATCATCGTTGTGCACGGCTTTGGGAGCTCCAAAGATATGAACTTTCCGACACCCCAAGAGCTAATAGAAGAATTGGGAATATATATTCTGCAATATGATCGGGCTGGGTATGGACAGAGTGATCCAAACCCCAAACGCTCACTGAAAAGTGAAGCACTTGACATTGAAGAGCTTGCTGATCAGTTACAAATAGGATCAAAGTTTTATGTGATTGGAGTCTCAATGGGATCACACGCTACTTGGAGTTCCCCAATCATCAACTATGAGTGGCCTTCCCTTCCTGAGAATCTGGTAAGGGAGGACTACAGAAGGAAACTTATCCAATGGGCTATGTGGCTTGCAAAGTACTCTCCTAAACTGTTGCACTGGTGGGTGACTCAAAAGTGGCTCCCTTCAAATTCTGTCATAGAAAAAAACCCAGCATTCTTCAACAGAAGAGATATAGACATTTTAGAGAGAATTCCTGGGTTCCCAATGCTTACCAAGGACAAATTGAGAGAACAAGTTGTTTTTGACACTCTCCGGGGTGACTGGATGGTGGCTTTTGGCAACTGGGAATTTGACCCAATGAAGCTAAGTAATCCATTCCCTCACCACACAAGTTCAGTTCACATTTGGCAGGGCTATGAAGATAAGGTAGTGCCCTCTCAAATCCAGAGATTCGTTTCAGGGAGGCTTCCCTGGATAGATTATCATGAAGTTCCAGACGGTGGCCATTTAATTGTACACTATAGTGGCTTATTTGAAGCCATTCTGAAGGCACTTTTACTTGGGGAAGAAAATCTTTCATATAGACCTAGATCAGCAATATGTATATCTTGATTTGACATTATCTCATAATCCAATATGTTTATTGTTGGTTCTTTTTTTTAGGAGATTGTCAAATCTGTAAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00104	109344	111240	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000104s00005988.1	PF12697.2	Abhydrolase_6	73	314	1.20E-17

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.278
SRR1783600	control	16.160
SRR1783602	moderate drought stress	9.700
SRR1811619	moderate drought stress	9.959

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	13.729
DRR006520	Root Summer glycyrrhizin high producing strain	13.207
DRR006521	Root Winter glycyrrhizin high producing strain	4.731
DRR006522	Root Winter glycyrrhizin high producing strain	4.743
DRR006523	Root Summer glycyrrhizin low producing strain	13.325
DRR006524	Root Summer glycyrrhizin low producing strain	13.299
DRR006525	Leaf Summer glycyrrhizin high producing strain	13.327
DRR006526	Leaf Summer glycyrrhizin high producing strain	13.026

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	37.126
SRR2868004	Drought Stress (root)	35.587
SRR2967015	Control (root)	36.409

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	12.737
SRR9715740	Leaf	15.495
SRR9715741	Leaf	16.730
SRR9715739	Root	6.816
SRR9715742	Root	8.024
SRR9715743	Root	8.430

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	16.946
SRR8749028	MeJA induced 9h	14.539
SRR8749029	MeJA induced 9h	11.563
SRR8749030	Uninduced	8.217
SRR8749031	Uninduced	3.115
SRR8749032	Uninduced	2.208

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	24.029
SRR8400027	Control - Root	24.011