Gene detail information of Glyur000104s00005977 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27590.1 | 1.00E-138 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| NR | KHN38641.1 | 0 | hypothetical protein glysoja_008190 [Glycine soja] |
| COG | NP_967917.1 | 3.00E-39 | hypothetical protein Bd0975 [Bdellovibrio bacteriovorus HD100] |
| trEMBL | tr|I1LKT0|I1LKT0_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G19100.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00104 | 58465 | 61399 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.159 |
| SRR1783600 | control | 13.220 |
| SRR1783602 | moderate drought stress | 9.683 |
| SRR1811619 | moderate drought stress | 9.486 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.594 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.816 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.527 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.871 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.360 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.305 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.916 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.692 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 34.335 |
| SRR2868004 | Drought Stress (root) | 29.997 |
| SRR2967015 | Control (root) | 26.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.505 |
| SRR9715740 | Leaf | 19.885 |
| SRR9715741 | Leaf | 15.883 |
| SRR9715739 | Root | 5.622 |
| SRR9715742 | Root | 14.206 |
| SRR9715743 | Root | 12.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.039 |
| SRR8749028 | MeJA induced 9h | 24.551 |
| SRR8749029 | MeJA induced 9h | 23.823 |
| SRR8749030 | Uninduced | 12.994 |
| SRR8749031 | Uninduced | 9.406 |
| SRR8749032 | Uninduced | 8.979 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.363 |
| SRR8400027 | Control - Root | 33.739 |