Gene detail information of Glyur000103s00007465 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G19970.1 | 5.00E-139 | alpha/beta-Hydrolases superfamily protein |
| NR | XP_004497243.1 | 0 | PREDICTED: transmembrane protein 53-like [Cicer arietinum] |
| trEMBL | tr|I1NF49|I1NF49_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G23580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00103 | 299532 | 302612 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000103s00007465.1 | PF05705.9 | DUF829 | 157 | 421 | 3.70E-69 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.093 |
| SRR1783600 | control | 1.149 |
| SRR1783602 | moderate drought stress | 2.167 |
| SRR1811619 | moderate drought stress | 2.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.312 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.367 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.485 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.385 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.110 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.370 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.525 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.404 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.697 |
| SRR2868004 | Drought Stress (root) | 19.232 |
| SRR2967015 | Control (root) | 16.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 94.512 |
| SRR9715740 | Leaf | 36.560 |
| SRR9715741 | Leaf | 117.326 |
| SRR9715739 | Root | 18.457 |
| SRR9715742 | Root | 41.503 |
| SRR9715743 | Root | 32.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.126 |
| SRR8749028 | MeJA induced 9h | 5.618 |
| SRR8749029 | MeJA induced 9h | 6.176 |
| SRR8749030 | Uninduced | 5.829 |
| SRR8749031 | Uninduced | 10.032 |
| SRR8749032 | Uninduced | 5.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 9.186 |
| SRR8400027 | Control - Root | 27.248 |