Gene detail information of Glyur000103s00007462 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G08350.1 | 6.00E-66 | GRAM domain-containing protein / ABA-responsive protein-related |
| NR | XP_004497247.1 | 2.00E-136 | PREDICTED: GEM-like protein 4-like [Cicer arietinum] |
| Swissprot | tr|Q9FTA0|GEML4_ARATH | 5.00E-81 | GEM-like protein 4 |
| trEMBL | tr|B7FJD2|B7FJD2_MEDTR | 1.00E-135 | GRAM domain protein/ABA-responsive-like protein {ECO:0000313|EMBL:KEH44421.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00103 | 284326 | 285611 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000103s00007462.1 | PF02893.15 | GRAM | 137 | 213 | 2.30E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.175 |
| SRR1783600 | control | 1.124 |
| SRR1783602 | moderate drought stress | 1.239 |
| SRR1811619 | moderate drought stress | 1.100 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.081 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.140 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.133 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.047 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.586 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.593 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.334 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.333 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.309 |
| SRR2868004 | Drought Stress (root) | 39.839 |
| SRR2967015 | Control (root) | 26.842 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.833 |
| SRR9715740 | Leaf | 0.153 |
| SRR9715741 | Leaf | 1.264 |
| SRR9715739 | Root | 0.299 |
| SRR9715742 | Root | 1.331 |
| SRR9715743 | Root | 0.721 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.173 |
| SRR8749028 | MeJA induced 9h | 6.871 |
| SRR8749029 | MeJA induced 9h | 2.993 |
| SRR8749030 | Uninduced | 11.455 |
| SRR8749031 | Uninduced | 164.504 |
| SRR8749032 | Uninduced | 44.084 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.521 |
| SRR8400027 | Control - Root | 7.089 |