Gene detail

Gene detail information of Glyur000103s00007460

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G23350.1	1.00E-53	GRAM domain-containing protein / ABA-responsive protein-related
NR	XP_004497248.1	1.24E-119	PREDICTED: putative GEM-like protein 8-like [Cicer arietinum]
Swissprot	tr\|Q9FMW6\|GEML6_ARATH	1.00E-71	GEM-like protein 6
trEMBL	tr\|A0A072VRY5\|A0A072VRY5_MEDTR	9.00E-117	GRAM domain protein/ABA-responsive-like protein {ECO:0000313\|EMBL:KEH44426.1}

Sequence

Transcript Sequence

>Glyur000103s00007460.1
AAACAATCCATGATGTCAAAATATTATCTTTAATATAACTGTCCTTCAAGTTGTCGTGGCAGTGTCTTTACATCAATCAAGATCATGGTTGATGATCCAAGGTTGAGTCATCCCCACCAAAGGGTCAAGATTCACTTCCTAGTTTTCATCCCTTTATATAGTACCTCCATGGAACACCAGGGACACTGATCAAACCAAGTAAGCATAACTTCCTTAGCAATCTAGTATCTCAGACCATTCCTCTTCATCTACAACTAGTCCTTTCAATAAAACAGAAACCTCATTAATCAATCAACATGCAGGCCTCACTTCTTCATGAGCTAGTTGTTGGAACTCCAATCATGTCAGCAACATATGATCAGTTTCAAAAGTCAGTTAACAGATACTTGCTTGAATATCCTGCCACTCAATGTCAATATCCAACCAAACTTCAAACCAAGGTAGGCAGAGTAAATTCTACTAAGAACAAGCTTGGAAGGAAGGTCAATAGTCTCTCACAAGGAGTCCAAGAACATGTGAGACTAGGGGCAAACATANCTGAAACTATAAAGAGGAGGTTGAGTTTAGGGGCTCGAATTCTCCAAGTGGGGGGAGTGGAGAAAGTCTTTAAGCAGTATTTTAATGTGGTAGATGGGGAGAGGCTGTTGAAAGCTTCCCAGTGTTATCTGTCCACCACATCTGGCCCTCTAGCAGGTCTTCTCTTCATCTCCACTGACAAGGTTGCCTTCTGCAGTGAGAGACCAATCAAAGTCTTTACTCAGAAAGGCCTAATGAGTAGAATCCGTTATAAGGTTGTGATTCCAGTGAAGAAGATCAAGTGTGTGAACCAGAGTCAAAATGTTGAGAAGCCAACACAGAAGTACATAAGGATAGTCACAGTGGACAATTTTGATTTCTGGTTTATGGGTGTCTTCAACTACCAGAAAACTTTCAACTGTCTTGAGCAGGCAATTTCTCAAGCTTAGGTTTATATCAGAAGTCCATCATTTGACCATAGAGAGCCGAGGCTTGAAGGCAACTTCATGTTGCCAAGGCAAACACTAAGATACAGGAGATGATAAACAAGAAGCTATAAAGTGACAGCTATAATTGGGATCTGTCTCTGAAAAAGGGGTATTGTCCATCTTGATGCCCAAAACATCTGTGAAAAGATGGGTATTGAGTATTGACCTGTGATAACAAATGCACATGGTTCACTTCATATCAGCTCAGCTGCAGACTTGGCTGTCAGCATATTGTGGATAAATAAAAGTTATGAAAGCAAGCAAGAGTTTGATCATTTGGTGAGTGCTTTAATTTGTTACAAAATCCAAGCCATGTTTATTCAGTGGCTGC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00103	277464	279117	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000103s00007460.1	PF02893.15	GRAM	103	179	9.30E-13

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.560
SRR1783600	control	1.504
SRR1783602	moderate drought stress	1.483
SRR1811619	moderate drought stress	1.661

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.244
DRR006520	Root Summer glycyrrhizin high producing strain	0.740
DRR006521	Root Winter glycyrrhizin high producing strain	1.643
DRR006522	Root Winter glycyrrhizin high producing strain	1.874
DRR006523	Root Summer glycyrrhizin low producing strain	1.566
DRR006524	Root Summer glycyrrhizin low producing strain	1.243
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.381
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.552

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	6.323
SRR2868004	Drought Stress (root)	15.664
SRR2967015	Control (root)	13.773

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.293
SRR9715740	Leaf	0.037
SRR9715741	Leaf	0.511
SRR9715739	Root	0.000
SRR9715742	Root	0.451
SRR9715743	Root	0.854

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.136
SRR8749028	MeJA induced 9h	0.201
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.930
SRR8749032	Uninduced	0.215

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.875
SRR8400027	Control - Root	2.205