Gene detail

Gene detail information of Glyur000103s00007450

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G20015.1	3.00E-151	Eukaryotic aspartyl protease family protein
NR	XP_004497254.1	0	PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Cicer arietinum]
Swissprot	tr\|Q9LHE3\|ASPG2_ARATH	0	Protein ASPARTIC PROTEASE IN GUARD CELL 2 (Precursor)
trEMBL	tr\|A0A072VS01\|A0A072VS01_MEDTR	0	Aspartic protease in GUARD CELL-like protein {ECO:0000313\|EMBL:KEH44446.1}

Sequence

Transcript Sequence

>Glyur000103s00007450.1
ATGGTCTTGGTGTTGCTGCTTCTACCGNTGCTCCTTCTAACCACATCCACTTCCACCCCAACCTCATCATCACCTTCCCATAACTATAACCTTTCATACCCTCATTTCCAGCACCTCAACGTGAAACAAGCCATTGCTGAAACGAAGCTGANGCCAAAGTTGAAGCCTTCCCAAACACCCAAACAACCCCACCAANCNCAAAAGGCCAATACCGAGTCCGAGAGTGAAGGATCAGGAAAATGGAAACTGAAGCTTCTTCACAGAGACAAAATCCCCACCTTTAACACTTCCCGTGATCATCGCAGCAGCTTCAATGCACGAATGAAGAGAGACGCCAAAAGGGTCGCCGCCGTTGCCCGCCGCCACGCCGGTTCCGCCGGGTACAAAACAGAGGAATTCGGGTCGGACGTGGTTTCGGGTATGGAACAGGGGAGCGGAGAGTACTTCGTTAGAATAGGAGTTGGAAGCCCACCCAAAAACCAATATGTGGTTATTGATTCGGGTAGTGACATCATATGGGTCCAATGTCAACCCTGTACCCAATGTTACCACCAATCCGACCCGGTTTTCGACCCGGCTGACTCGTCGTCTTACGCGGGCGTGTCCTGTGGCTCCACCGTGTGCAGCCGTGTGGAGAACGCCGGTTGCCATGAAAGGAGGTGCCGTTACGAGGTTTCTTATGGGGACGGGTCCTACACCAAAGGGACACTCGCCCTTGAGACACTCACTTTNGGGCGAACCGTGATCCGAAACGTGGCGATCGGATGCGGGCACCGGAACCAGGGCATGTTTGTCGGGGCGGCCGGGTTGTTGGGCCTTGGAGGTGGGTCCATGTCTTTTGTGGGCCAACTGGGTGGCCAAACTGGTGGTGCTTTTAGTTATTGCTTGGTGAGTCGGGGCACTGAGTCATCCGGGTCACTTGAATTCGGCCGAGAGACGGTGCCCGTGGGCGCAGCATGGGCTCCACTGATCCATAACCCACGGGCCCCGAGCTTTTACTATGTTGGGCTTTTGGGTCTTGGAGTCGGGGGCCTAAGGGTGCCCGTATCCGAGGATGTTTTCCGCCTAACTGAATTGGGTGAAGGAGGGGTGGTCATGGACACCGGCACNGCCGTGACTAGGCTGCCGACGGCAGCTTACAACGCGTTCCGGGATGCTTTTGTTGCCCAAACCACAAACCTGCCCCGGGCATCTAGAGTATCCATCTTTGACACTTGCTATGACTTGTTTGGGTTTGTGTCGGTCCGGGTTCCNACCGTATCCTTTTACTTCTCGGGTGGGCCTATCCTGACCCTTCCAGCTAGGAACTTCTTAATTCCAGTGGATGATGTTGGAACGTTCTGCTTTGCATTTGCNCCTTCTCCTTCAGGGCTTTCCATTATAGGGAACATCCAGCAAGAAGGGATTGAAATTTCGGTCGATGGAGCTAATGGGTTTGTGGGATTTGGACCCAATGTCTGTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00103	218167	219630	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004190 aspartic-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000103s00007450.1	PF14543.1	TAXi_N	148	310	5.00E-41
Glyur000103s00007450.1	PF14541.1	TAXi_C	332	483	3.10E-35

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	16.544
SRR1783600	control	16.637
SRR1783602	moderate drought stress	13.383
SRR1811619	moderate drought stress	13.098

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	22.938
DRR006520	Root Summer glycyrrhizin high producing strain	22.872
DRR006521	Root Winter glycyrrhizin high producing strain	0.293
DRR006522	Root Winter glycyrrhizin high producing strain	0.345
DRR006523	Root Summer glycyrrhizin low producing strain	9.686
DRR006524	Root Summer glycyrrhizin low producing strain	9.518
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.518
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.911

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	158.141
SRR2868004	Drought Stress (root)	188.971
SRR2967015	Control (root)	261.879

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	5.361
SRR9715740	Leaf	5.093
SRR9715741	Leaf	2.327
SRR9715739	Root	11.250
SRR9715742	Root	11.976
SRR9715743	Root	11.642

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.515
SRR8749028	MeJA induced 9h	0.285
SRR8749029	MeJA induced 9h	0.324
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.000
SRR8749032	Uninduced	0.044

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.042
SRR8400027	Control - Root	12.413