Gene detail information of Glyur000103s00007441 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31840.1 | 3.00E-76 | Thioredoxin superfamily protein |
| NR | KEH44453.1 | 6.08E-152 | thioredoxin superfamily protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072VSR3|A0A072VSR3_MEDTR | 2.00E-152 | Thioredoxin superfamily protein, putative {ECO:0000313|EMBL:KEH44453.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00103 | 172970 | 175268 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.308 |
| SRR1783600 | control | 5.254 |
| SRR1783602 | moderate drought stress | 7.077 |
| SRR1811619 | moderate drought stress | 6.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.553 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.659 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.167 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.154 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.025 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.032 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 18.324 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.598 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.231 |
| SRR2868004 | Drought Stress (root) | 8.468 |
| SRR2967015 | Control (root) | 8.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.916 |
| SRR9715740 | Leaf | 31.153 |
| SRR9715741 | Leaf | 19.351 |
| SRR9715739 | Root | 1.039 |
| SRR9715742 | Root | 5.216 |
| SRR9715743 | Root | 3.391 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.730 |
| SRR8749028 | MeJA induced 9h | 5.231 |
| SRR8749029 | MeJA induced 9h | 3.695 |
| SRR8749030 | Uninduced | 2.240 |
| SRR8749031 | Uninduced | 0.649 |
| SRR8749032 | Uninduced | 0.651 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.067 |
| SRR8400027 | Control - Root | 11.432 |