Gene detail information of Glyur000103s00007423 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G28150.1 | 3.00E-36 | Domain of unknown function (DUF966) |
| NR | XP_006589751.1 | 4.54E-124 | PREDICTED: protein UPSTREAM OF FLC-like [Glycine max] |
| Swissprot | tr|Q9LX14|UFC_ARATH | 2.00E-33 | Protein UPSTREAM OF FLC |
| trEMBL | tr|I1LFC8|I1LFC8_SOYBN | 2.00E-124 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA10G43650.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00103 | 64261 | 65378 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000103s00007423.1 | PF06136.8 | DUF966 | 39 | 278 | 1.80E-68 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.194 |
| SRR1783600 | control | 4.805 |
| SRR1783602 | moderate drought stress | 2.099 |
| SRR1811619 | moderate drought stress | 2.125 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.217 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.776 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.810 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.994 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.264 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.315 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.997 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.852 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.632 |
| SRR2868004 | Drought Stress (root) | 1.984 |
| SRR2967015 | Control (root) | 1.796 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.785 |
| SRR9715740 | Leaf | 0.333 |
| SRR9715741 | Leaf | 1.218 |
| SRR9715739 | Root | 0.301 |
| SRR9715742 | Root | 1.359 |
| SRR9715743 | Root | 1.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 87.168 |
| SRR8749028 | MeJA induced 9h | 19.905 |
| SRR8749029 | MeJA induced 9h | 27.305 |
| SRR8749030 | Uninduced | 0.491 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 1.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.474 |
| SRR8400027 | Control - Root | 9.010 |