Gene detail information of Glyur000103s00007415 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01140.1 | 5.00E-08 | Protein of unknown function (DUF674) |
| NR | KEH44490.1 | 4.41E-48 | DUF674 family protein [Medicago truncatula] |
| trEMBL | tr|A0A072W2M3|A0A072W2M3_MEDTR | 2.00E-48 | DUF674 family protein {ECO:0000313|EMBL:KEH44490.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00103 | 21955 | 23075 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000103s00007415.1 | PF05056.7 | DUF674 | 5 | 125 | 1.60E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.732 |
| SRR1783600 | control | 3.893 |
| SRR1783602 | moderate drought stress | 2.502 |
| SRR1811619 | moderate drought stress | 2.437 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.314 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.360 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.368 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.369 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.620 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.475 |
| SRR2868004 | Drought Stress (root) | 0.602 |
| SRR2967015 | Control (root) | 0.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.165 |
| SRR9715740 | Leaf | 0.690 |
| SRR9715741 | Leaf | 0.583 |
| SRR9715739 | Root | 0.562 |
| SRR9715742 | Root | 0.831 |
| SRR9715743 | Root | 1.108 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.184 |
| SRR8749029 | MeJA induced 9h | 0.273 |
| SRR8749030 | Uninduced | 0.140 |
| SRR8749031 | Uninduced | 0.471 |
| SRR8749032 | Uninduced | 0.063 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.114 |
| SRR8400027 | Control - Root | 4.079 |