Gene detail information of Glyur000102s00010979 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29850.1 | 3.00E-42 | Eukaryotic protein of unknown function (DUF872) |
| NR | XP_004507921.1 | 5.93E-63 | PREDICTED: transmembrane protein 230-like [Cicer arietinum] |
| trEMBL | tr|G7JT77|G7JT77_MEDTR | 7.00E-63 | Uncharacterized protein {ECO:0000313|EMBL:AFK39855.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00102 | 349069 | 350863 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000102s00010979.1 | PF05915.7 | DUF872 | 11 | 102 | 1.60E-28 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.975 |
| SRR1783600 | control | 20.371 |
| SRR1783602 | moderate drought stress | 21.363 |
| SRR1811619 | moderate drought stress | 21.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 30.820 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 31.103 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 22.468 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 21.700 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 30.070 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 29.757 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.349 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 21.036 |
| SRR2868004 | Drought Stress (root) | 27.036 |
| SRR2967015 | Control (root) | 32.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.718 |
| SRR9715740 | Leaf | 15.516 |
| SRR9715741 | Leaf | 19.286 |
| SRR9715739 | Root | 13.420 |
| SRR9715742 | Root | 17.621 |
| SRR9715743 | Root | 14.324 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 29.845 |
| SRR8749028 | MeJA induced 9h | 73.030 |
| SRR8749029 | MeJA induced 9h | 83.556 |
| SRR8749030 | Uninduced | 36.413 |
| SRR8749031 | Uninduced | 70.473 |
| SRR8749032 | Uninduced | 76.766 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 32.265 |
| SRR8400027 | Control - Root | 33.375 |