Gene detail information of Glyur000102s00010959 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G29920.1 | 7.00E-180 | Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein |
| NR | XP_003550643.1 | 0 | PREDICTED: chaperone protein ClpB1-like [Glycine max] |
| trEMBL | tr|I1LVL3|I1LVL3_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G00460.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00102 | 229978 | 233825 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.823 |
| SRR1783600 | control | 4.925 |
| SRR1783602 | moderate drought stress | 4.699 |
| SRR1811619 | moderate drought stress | 4.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.502 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.422 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.107 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.106 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.523 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.567 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.082 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.043 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.987 |
| SRR2868004 | Drought Stress (root) | 10.536 |
| SRR2967015 | Control (root) | 13.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.164 |
| SRR9715740 | Leaf | 0.082 |
| SRR9715741 | Leaf | 0.531 |
| SRR9715739 | Root | 0.258 |
| SRR9715742 | Root | 1.850 |
| SRR9715743 | Root | 1.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.069 |
| SRR8749028 | MeJA induced 9h | 0.022 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.769 |
| SRR8400027 | Control - Root | 8.953 |