Gene detail information of Glyur000102s00010936 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G76600.1 | 2.00E-08 | |
| NR | XP_003610064.1 | 9.73E-72 | hypothetical protein MTR_4g127530 [Medicago truncatula] |
| trEMBL | tr|G7JUB6|G7JUB6_MEDTR | 4.00E-72 | DUF4228 domain protein {ECO:0000313|EMBL:AES92261.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00102 | 68210 | 68912 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000102s00010936.1 | PF14009.1 | DUF4228 | 1 | 120 | 5.60E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.744 |
| SRR1783600 | control | 1.654 |
| SRR1783602 | moderate drought stress | 1.049 |
| SRR1811619 | moderate drought stress | 1.173 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.364 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.726 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.646 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.736 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.171 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.212 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.180 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.180 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.027 |
| SRR2868004 | Drought Stress (root) | 12.738 |
| SRR2967015 | Control (root) | 32.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.649 |
| SRR9715740 | Leaf | 0.418 |
| SRR9715741 | Leaf | 3.218 |
| SRR9715739 | Root | 1.056 |
| SRR9715742 | Root | 1.342 |
| SRR9715743 | Root | 1.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.826 |
| SRR8749028 | MeJA induced 9h | 1.027 |
| SRR8749029 | MeJA induced 9h | 0.364 |
| SRR8749030 | Uninduced | 2.159 |
| SRR8749031 | Uninduced | 1.554 |
| SRR8749032 | Uninduced | 3.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.946 |
| SRR8400027 | Control - Root | 10.497 |