Gene detail information of Glyur000101s00010340 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G25610.1 | 1.00E-88 | BURP domain-containing protein |
| NR | KHN15367.1 | 3.73E-180 | Dehydration-responsive protein RD22 [Glycine soja] |
| Swissprot | tr|Q08298|RD22_ARATH | 3.00E-126 | Dehydration-responsive protein RD22 (Precursor) |
| trEMBL | tr|I1M9X6|I1M9X6_SOYBN | 1.00E-180 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G20450.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00101 | 297533 | 303830 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000101s00010340.1 | PF03181.10 | BURP | 196 | 409 | 2.70E-91 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 160.506 |
| SRR1783600 | control | 161.404 |
| SRR1783602 | moderate drought stress | 118.306 |
| SRR1811619 | moderate drought stress | 117.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.111 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.110 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.170 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.191 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.028 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 61.752 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 61.038 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 156.118 |
| SRR2868004 | Drought Stress (root) | 201.779 |
| SRR2967015 | Control (root) | 207.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 68.420 |
| SRR9715740 | Leaf | 66.385 |
| SRR9715741 | Leaf | 93.290 |
| SRR9715739 | Root | 884.740 |
| SRR9715742 | Root | 298.147 |
| SRR9715743 | Root | 391.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 354.436 |
| SRR8400027 | Control - Root | 324.336 |