Gene detail information of Glyur000101s00010333 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G32690.1 | 2.00E-65 | hemoglobin 3 |
| NR | XP_003603592.1 | 7.23E-104 | 2-on-2 hemoglobin [Medicago truncatula] |
| COG | YP_006440763.1 | 6.00E-52 | globin [Turneriella parva DSM 21527] |
| Swissprot | tr|Q67XG0|GLB3_ARATH | 2.00E-88 | Two-on-two hemoglobin-3 |
| trEMBL | tr|G7J2X4|G7J2X4_MEDTR | 3.00E-104 | 2-on-2 hemoglobin {ECO:0000313|EMBL:AES73843.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00101 | 262854 | 264285 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000101s00010333.1 | PF01152.16 | Bac_globin | 26 | 143 | 3.20E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.523 |
| SRR1783600 | control | 3.520 |
| SRR1783602 | moderate drought stress | 3.028 |
| SRR1811619 | moderate drought stress | 3.106 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.301 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.963 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 34.259 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 33.313 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.780 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.267 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 7.307 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.685 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 22.021 |
| SRR2868004 | Drought Stress (root) | 24.553 |
| SRR2967015 | Control (root) | 20.989 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.693 |
| SRR9715740 | Leaf | 7.882 |
| SRR9715741 | Leaf | 5.732 |
| SRR9715739 | Root | 1.222 |
| SRR9715742 | Root | 5.154 |
| SRR9715743 | Root | 4.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 47.343 |
| SRR8749028 | MeJA induced 9h | 111.917 |
| SRR8749029 | MeJA induced 9h | 197.297 |
| SRR8749030 | Uninduced | 91.150 |
| SRR8749031 | Uninduced | 155.286 |
| SRR8749032 | Uninduced | 315.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.567 |
| SRR8400027 | Control - Root | 8.508 |