Gene detail information of Glyur000101s00010328


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT5G24840.14.00E-115tRNA (guanine-N-7) methyltransferase
NRXP_007137156.17.37E-176hypothetical protein PHAVU_009G104500g [Phaseolus vulgaris]
COGYP_007057199.12.00E-20tRNA (guanine-N(7)-)-methyltransferase [Rivularia sp. PCC 7116]
Swissprottr|Q8GXB7|TRMB_ARATH4.00E-145tRNA (guanine-N(7)-)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_03055}
trEMBLtr|V7AV54|V7AV54_PHAVU3.00E-176tRNA (guanine-N(7)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_03055}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold00101245699246466+


Gene family

Gene familysubfamily
----


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006400  tRNA modification


molecular_function

GO:0008176  tRNA (guanine-N7-)-methyltransferase activity



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000101s00010328.1PF02390.12Methyltransf_4492477.60E-52


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control16.588
SRR1783600control17.527
SRR1783602moderate drought stress12.526
SRR1811619moderate drought stress12.533

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain16.326
DRR006520Root Summer glycyrrhizin high producing strain15.642
DRR006521Root Winter glycyrrhizin high producing strain24.148
DRR006522Root Winter glycyrrhizin high producing strain23.338
DRR006523Root Summer glycyrrhizin low producing strain12.952
DRR006524Root Summer glycyrrhizin low producing strain13.137
DRR006525Leaf Summer glycyrrhizin high producing strain6.475
DRR006526Leaf Summer glycyrrhizin high producing strain6.048

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)18.818
SRR2868004Drought Stress (root)13.750
SRR2967015Control (root)12.768

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf4.498
SRR9715740Leaf6.045
SRR9715741Leaf6.358
SRR9715739Root6.350
SRR9715742Root8.408
SRR9715743Root7.245

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h46.632
SRR8749028MeJA induced 9h29.538
SRR8749029MeJA induced 9h28.887
SRR8749030Uninduced9.804
SRR8749031Uninduced13.313
SRR8749032Uninduced6.007

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root13.857
SRR8400027Control - Root11.066

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved