Gene detail information of Glyur000101s00010326 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31340.1 | 2.00E-116 | myosin heavy chain-related |
| NR | XP_003603582.1 | 0 | hypothetical protein MTR_3g109330 [Medicago truncatula] |
| trEMBL | tr|G7J2W4|G7J2W4_MEDTR | 0 | Uncharacterized protein {ECO:0000313|EMBL:AFK42631.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00101 | 222001 | 232566 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 81.176 |
| SRR1783600 | control | 81.343 |
| SRR1783602 | moderate drought stress | 62.703 |
| SRR1811619 | moderate drought stress | 63.095 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 67.431 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 66.445 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 247.946 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 241.387 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 32.625 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.815 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 73.790 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 73.559 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 172.328 |
| SRR2868004 | Drought Stress (root) | 132.801 |
| SRR2967015 | Control (root) | 117.270 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 64.121 |
| SRR9715740 | Leaf | 62.711 |
| SRR9715741 | Leaf | 59.186 |
| SRR9715739 | Root | 13.674 |
| SRR9715742 | Root | 63.531 |
| SRR9715743 | Root | 54.189 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 144.913 |
| SRR8749028 | MeJA induced 9h | 135.303 |
| SRR8749029 | MeJA induced 9h | 104.165 |
| SRR8749030 | Uninduced | 133.238 |
| SRR8749031 | Uninduced | 173.485 |
| SRR8749032 | Uninduced | 102.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 138.642 |
| SRR8400027 | Control - Root | 118.951 |