Gene detail information of Glyur000101s00010321 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G31330.1 | 1.00E-95 | Protein of unknown function, DUF599 |
| NR | XP_003526465.1 | 1.15E-149 | PREDICTED: uncharacterized protein LOC100780305 [Glycine max] |
| COG | YP_004371043.1 | 5.00E-33 | hypothetical protein Desac_2033 [Desulfobacca acetoxidans DSM 11109] |
| trEMBL | tr|I1K969|I1K969_SOYBN | 4.00E-150 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G08360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00101 | 194300 | 196584 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000101s00010321.1 | PF04654.7 | DUF599 | 11 | 216 | 2.00E-68 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.412 |
| SRR1783600 | control | 0.451 |
| SRR1783602 | moderate drought stress | 3.028 |
| SRR1811619 | moderate drought stress | 3.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.557 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.544 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.087 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.674 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.521 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.474 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.826 |
| SRR2868004 | Drought Stress (root) | 69.610 |
| SRR2967015 | Control (root) | 39.392 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.955 |
| SRR9715740 | Leaf | 0.488 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.263 |
| SRR9715742 | Root | 2.586 |
| SRR9715743 | Root | 2.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.069 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.062 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.684 |
| SRR8400027 | Control - Root | 6.155 |