Gene detail

Gene detail information of Glyur000101s00010318

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G24395.1	3.00E-27	chaperone protein dnaJ-related
NR	XP_007137147.1	2.92E-40	hypothetical protein PHAVU_009G103700g [Phaseolus vulgaris]
trEMBL	tr\|V7AY57\|V7AY57_PHAVU	1.00E-40	Uncharacterized protein {ECO:0000313\|EMBL:ESW09141.1}

Sequence

Transcript Sequence

>Glyur000101s00010318.1
CAAGGTTAAAACATTTCGTAAAGGATAAGGAGATGAGTGATGAGGAAGAACATTGTCCCGTTCCATTCCAATCCTCCACGGTGACGGTACACTCTCATGGGCATGGCCGTTGCATTTGCACCGTTTCTGACACTCCCTTCAATTTCCCGTCCCTGGCGATGTCGTAGCCTTGTTGTTCCTAATAGTTATACTCACACGCATCGCATGAACATGATCATGTGTGTCAAGGTAGTTGATGCAGATGCAGATGCAAGTGCAGGAACCATCATGTGTGAAGCTTGCAATGGGAAAGGATGGTTACTCTGTGATTTCTGTAATGGCCAAAAGACCAATGTCAAAGCTGAAAACAAACGCATCTACCGTCGATGTCCCTCCTGCAGAGCCGTTGGGTATGTACTGTGTTCCAAGTGCAAGGTCTTCAAATGTGTCACTTTTCCCAATTTCGACGATTCTAACAATTGATCAACTTCCATTTTTCACATCTTATCCAATCCCAATGCCTAAATGGTTGTTCACCAACAAAGATTCATTCAACCGAGGTGCTTCTTTTTTATATATGTCTCCCTCCCACGTGTACAATTTCATTTACCATTGAGAGGTATTGATTCCATTTACCTGTCACAGGGTTTAAGAAAGGGATATGGTTGACTGGTGTATGTAATGTGGCTCTTGTGATTTTAAAAATTGTAAATTTCCATGCGTTATTAATTCTTGATATATATTCTACTCTTCACTTATAACTTCAGTTTTTGTTAATTTTTAGATCACAGGCGGAGGTTGGGAGTAATATATAGTGCCATAGACTAGTCCTCTTTTCTGTTTCGTTTTTAAGCATACTAGTTGTTAATTTAAAAAAGTAATCAAATCAGGACGAGATTCTGCACTGTTAGAGCTAAATCGGTACAGTTCAGAGCTTGTAGATTTGGTTTGTGCAAGTCTTGCTTAGATTTTTGTTCCCTCATAATTAAGTTGCAATTACACAGGTATATATTCTAATGATTATTATGACTGTTTTAATATGGAGGCAGCACGTGATCTCATTGGTAATCTGATCTCACTACTGAAGCTTCCAAGTAGAACAACGACTTTGAATTTTCCCCAGCTGATTACACATGGACCCAAGTACAGATATCTGATA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00101	175699	176944	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0031072 heat shock protein binding

GO:0051082 unfolded protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.638
SRR1783600	control	0.675
SRR1783602	moderate drought stress	0.498
SRR1811619	moderate drought stress	0.500

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.855
DRR006520	Root Summer glycyrrhizin high producing strain	0.847
DRR006521	Root Winter glycyrrhizin high producing strain	0.979
DRR006522	Root Winter glycyrrhizin high producing strain	0.953
DRR006523	Root Summer glycyrrhizin low producing strain	0.776
DRR006524	Root Summer glycyrrhizin low producing strain	0.778
DRR006525	Leaf Summer glycyrrhizin high producing strain	17.804
DRR006526	Leaf Summer glycyrrhizin high producing strain	17.807

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.361
SRR2868004	Drought Stress (root)	2.409
SRR2967015	Control (root)	1.238

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.460
SRR9715740	Leaf	24.325
SRR9715741	Leaf	17.206
SRR9715739	Root	1.394
SRR9715742	Root	0.594
SRR9715743	Root	0.898

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	11.861
SRR8749028	MeJA induced 9h	11.769
SRR8749029	MeJA induced 9h	11.861
SRR8749030	Uninduced	5.312
SRR8749031	Uninduced	11.822
SRR8749032	Uninduced	7.738

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	2.305
SRR8400027	Control - Root	2.117