Gene detail

Gene detail information of Glyur000101s00010315

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G24390.1	1.00E-50	AIG2-like (avirulence induced gene) family protein
NR	XP_004501215.1	8.97E-99	PREDICTED: LOW QUALITY PROTEIN: AIG2-like protein-like [Cicer arietinum]
COG	YP_004585180.1	3.00E-15	AIG2 family protein [Frankia symbiont of Datisca glomerata]
Swissprot	tr\|Q9FIX2\|AIG2L_ARATH	9.00E-43	AIG2-like protein
trEMBL	tr\|G7J2V1\|G7J2V1_MEDTR	7.00E-98	AIG2-like (Avirulence induced protein) family protein {ECO:0000313\|EMBL:AES73820.1}

Sequence

Transcript Sequence

>Glyur000101s00010315.1
ATCTGCAGCAATAATTTTAATGACGTGTCCTGAATCAAAGGGGAAAAACTTTCCCTTCGTCAAACTCCCGATTGCANAAGTAGGAAGTTTGCTACTAATGCTAATAATTAATAACTAATAATCATAATCAATAAATCAATAAATAAAAGAGGGAATTTGGGAGAAGNAGAGGAGAGGAGAAGAAGATGAGCGTGGTGGCGAATGGTGGAGTAGTAGGAGGAGTGGGAGAGAGTCACAGTACTCACAACGTGTTCGTGTATGGCAGCCTCCTGGCGGATGAGGTGGTCCGTGTCCTCTTGAATCGCGTCCCTTCATCAGCACCCGCTACTCTCCCCGACTATCATAGGTTTAAGATCAAAGGTCGCGTTTATCCCGCTATTCTCCCCGTCCAGAATAAGAAAGTCACTGGCAGGGTCCTTCAAGGTATCTCTGGATTGGAACTCCATGTTTTAGATGAGTTCGAGGATGTTGAATACACTAGAACTGAGGTTGACGTTCTCTTCATGGACAATTCTGAAAAGTTGCGAGTTCACGCTTATGTTTGGAGCAATCCAAATGATCCGGACTTGTATGCAGAGTGGGATTTTGAGGAATGGAAACAAGTTCACAAGAATGATTTCGTCAAGATGACTGATGGCTTCATGCAACAGTTGGAACTGCCAGAATCAAAGCCAAGAGTTCAGACTTATGAAACCTTCTATAAGCAAGAAAACGATAAGCCAGTTGAGCCTTGATGCTTACAGCTTGTAAAAATTATGCCTTGTGTGCACTTTGCAGTGTTGTATGATTCTTAATTGAATCATACTGTTACAGTTAATAATTATTAGTTTCTCTTCGAATAATTCATTTGTATGATTTAATAAGCATCTTAATGACATCTTTTTTACAATGACAAGGTTTCANTAGTATATTTAACATTTATGAGTAAATTCAGATTATTTCCTGGAGCCTCCTTTATGAACCCCCTTCTCATTAAGCTTCTGTTGTAAAATTGTTTTGCTCTTGAGAGTGGAAACTTTCAACCAATTGCATGAACTGTTGCACCAGAACCTCCATCAGTAATNTTGGCTCCGCTTGATGTCACAGCTCCAGGTTTAGATGCTGCAACAACAACTGTATTAAGTGTGCAACCCTATCTGTTTCATTAGAGCCAAGTCCACAAGCACTGCAGCTAGTAGCTATAGTGGCGCTGCAAATGATAGTTGAAAAAGAGTGAGTGGGCACGAAATGCATTTAACATGTGGCTGCTTATAATGTTAAGAAGTCAGTTAAGAAGTCACAGAAGTAAACAATAGATATCTGCAATAAATTTCATAGAAATGACCAAATGCTGACAACCAAAGTCAGTTTATTCTATAGGTCTACATGAATGAACTCGTGCGGTAGTATGATTTGTAAAAACTACAGATTTATGCTTTAGAATCCAAAATGAACTCAAACTCGGGCACATGATGCAAACATTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00101	166247	169419	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000101s00010315.1	PF06094.7	AIG2	22	120	7.80E-15

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	21.559
SRR1783600	control	21.575
SRR1783602	moderate drought stress	47.281
SRR1811619	moderate drought stress	46.511

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	41.871
DRR006520	Root Summer glycyrrhizin high producing strain	42.018
DRR006521	Root Winter glycyrrhizin high producing strain	49.724
DRR006522	Root Winter glycyrrhizin high producing strain	48.297
DRR006523	Root Summer glycyrrhizin low producing strain	41.037
DRR006524	Root Summer glycyrrhizin low producing strain	40.951
DRR006525	Leaf Summer glycyrrhizin high producing strain	20.572
DRR006526	Leaf Summer glycyrrhizin high producing strain	20.533

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	70.628
SRR2868004	Drought Stress (root)	81.916
SRR2967015	Control (root)	76.666

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	28.298
SRR9715740	Leaf	42.406
SRR9715741	Leaf	40.146
SRR9715739	Root	14.328
SRR9715742	Root	21.909
SRR9715743	Root	19.955

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	20.168
SRR8749028	MeJA induced 9h	21.034
SRR8749029	MeJA induced 9h	22.854
SRR8749030	Uninduced	21.784
SRR8749031	Uninduced	15.666
SRR8749032	Uninduced	20.734

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	62.148
SRR8400027	Control - Root	60.617