Gene detail information of Glyur000101s00010312 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G21080.1 | 4.00E-112 | |
| NR | KHN18230.1 | 0 | hypothetical protein glysoja_025120 [Glycine soja] |
| trEMBL | tr|I1K962|I1K962_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G08240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00101 | 153099 | 155158 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000101s00010312.1 | PF12056.3 | DUF3537 | 60 | 430 | 1.40E-115 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.476 |
| SRR1783600 | control | 1.491 |
| SRR1783602 | moderate drought stress | 1.484 |
| SRR1811619 | moderate drought stress | 1.515 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.914 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.961 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.313 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.209 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.439 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.675 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.347 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.346 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.453 |
| SRR2868004 | Drought Stress (root) | 3.566 |
| SRR2967015 | Control (root) | 3.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.164 |
| SRR9715740 | Leaf | 0.204 |
| SRR9715741 | Leaf | 0.252 |
| SRR9715739 | Root | 1.025 |
| SRR9715742 | Root | 1.405 |
| SRR9715743 | Root | 1.340 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.143 |
| SRR8749028 | MeJA induced 9h | 1.020 |
| SRR8749029 | MeJA induced 9h | 1.138 |
| SRR8749030 | Uninduced | 1.100 |
| SRR8749031 | Uninduced | 0.420 |
| SRR8749032 | Uninduced | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.773 |
| SRR8400027 | Control - Root | 3.101 |